A customizable software for fast reduction and analysis of large X‐ray scattering data sets: applications of the new DPDAK package to small‐angle X‐ray scattering and grazing‐incidence small‐angle X‐ray scattering. (1st October 2014)
- Record Type:
- Journal Article
- Title:
- A customizable software for fast reduction and analysis of large X‐ray scattering data sets: applications of the new DPDAK package to small‐angle X‐ray scattering and grazing‐incidence small‐angle X‐ray scattering. (1st October 2014)
- Main Title:
- A customizable software for fast reduction and analysis of large X‐ray scattering data sets: applications of the new DPDAK package to small‐angle X‐ray scattering and grazing‐incidence small‐angle X‐ray scattering
- Authors:
- Benecke, Gunthard
Wagermaier, Wolfgang
Li, Chenghao
Schwartzkopf, Matthias
Flucke, Gero
Hoerth, Rebecca
Zizak, Ivo
Burghammer, Manfred
Metwalli, Ezzeldin
Müller‐Buschbaum, Peter
Trebbin, Martin
Förster, Stephan
Paris, Oskar
Roth, Stephan V.
Fratzl, Peter - Abstract:
- <abstract abstract-type="main" xml:lang="en"> <title> <x xml:space="preserve">Abstract</x> </title> <p>X‐ray scattering experiments at synchrotron sources are characterized by large and constantly increasing amounts of data. The great number of files generated during a synchrotron experiment is often a limiting factor in the analysis of the data, since appropriate software is rarely available to perform fast and tailored data processing. Furthermore, it is often necessary to perform online data reduction and analysis during the experiment in order to interactively optimize experimental design. This article presents an open‐source software package developed to process large amounts of data from synchrotron scattering experiments. These data reduction processes involve calibration and correction of raw data, one‐ or two‐dimensional integration, as well as fitting and further analysis of the data, including the extraction of certain parameters. The software, <italic>DPDAK</italic> (directly programmable data analysis kit), is based on a plug‐in structure and allows individual extension in accordance with the requirements of the user. The article demonstrates the use of <italic>DPDAK</italic> for on‐ and offline analysis of scanning small‐angle X‐ray scattering (SAXS) data on biological samples and microfluidic systems, as well as for a comprehensive analysis of grazing‐incidence SAXS data. In addition to a comparison with existing software packages, the structure of<abstract abstract-type="main" xml:lang="en"> <title> <x xml:space="preserve">Abstract</x> </title> <p>X‐ray scattering experiments at synchrotron sources are characterized by large and constantly increasing amounts of data. The great number of files generated during a synchrotron experiment is often a limiting factor in the analysis of the data, since appropriate software is rarely available to perform fast and tailored data processing. Furthermore, it is often necessary to perform online data reduction and analysis during the experiment in order to interactively optimize experimental design. This article presents an open‐source software package developed to process large amounts of data from synchrotron scattering experiments. These data reduction processes involve calibration and correction of raw data, one‐ or two‐dimensional integration, as well as fitting and further analysis of the data, including the extraction of certain parameters. The software, <italic>DPDAK</italic> (directly programmable data analysis kit), is based on a plug‐in structure and allows individual extension in accordance with the requirements of the user. The article demonstrates the use of <italic>DPDAK</italic> for on‐ and offline analysis of scanning small‐angle X‐ray scattering (SAXS) data on biological samples and microfluidic systems, as well as for a comprehensive analysis of grazing‐incidence SAXS data. In addition to a comparison with existing software packages, the structure of <italic>DPDAK</italic> and the possibilities and limitations are discussed.</p> </abstract> … (more)
- Is Part Of:
- Journal of applied crystallography. Volume 47:Part 5(2014:Oct.)
- Journal:
- Journal of applied crystallography
- Issue:
- Volume 47:Part 5(2014:Oct.)
- Issue Display:
- Volume 47, Issue 5, Part 5 (2014)
- Year:
- 2014
- Volume:
- 47
- Issue:
- 5
- Part:
- 5
- Issue Sort Value:
- 2014-0047-0005-0005
- Page Start:
- 1797
- Page End:
- 1803
- Publication Date:
- 2014-10-01
- Subjects:
- Crystallography -- Periodicals
548.05 - Journal URLs:
- http://firstsearch.oclc.org ↗
http://journals.iucr.org/j/journalhomepage.html ↗
http://www-us.ebsco.com/online/direct.asp?JournalID=105188 ↗
http://www.blackwell-synergy.com/loi/jcr ↗
http://www.blackwell-synergy.com/servlet/useragent?func=showIssues&code=jcr&open=2004#C2004 ↗
http://onlinelibrary.wiley.com/journal/10.1107/S16005767 ↗
http://onlinelibrary.wiley.com/ ↗ - DOI:
- 10.1107/S1600576714019773 ↗
- Languages:
- English
- ISSNs:
- 0021-8898
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 4942.400000
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 3570.xml