IQuant: An automated pipeline for quantitative proteomics based upon isobaric tags. Issue 20 (5th September 2014) - Wen, Bo
Abstract Quantitative proteomics technology based on isobaric tags is playing an important role in proteomic investigation. In this paper, we present an automated software, named IQuant, which integrates a postprocessing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags and aims at proteomics quantification. The software of IQuant, which is freely downloaded at http://sourceforge.net/projects/iquant/, can run from a graphical user interface and a command‐line interface, and can work on both Windows and Linux systems.