Efficient Calculation of Anharmonic Vibrational Spectra of Large Molecules with Localized Modes. Issue 15 (30th July 2014)
- Record Type:
- Journal Article
- Title:
- Efficient Calculation of Anharmonic Vibrational Spectra of Large Molecules with Localized Modes. Issue 15 (30th July 2014)
- Main Title:
- Efficient Calculation of Anharmonic Vibrational Spectra of Large Molecules with Localized Modes
- Authors:
- Panek, Paweł T.
Jacob, Christoph R. - Abstract:
- <abstract abstract-type="main" xml:lang="en"> <title>Abstract</title> <p>The analysis and interpretation of the vibrational spectra of complex (bio)molecular systems, such as polypeptides and proteins, requires support from quantum‐chemical calculations. Such calculations are currently restricted to the harmonic approximation. Here, we show how one of the main bottlenecks in such calculations, the evaluation of the potential energy surface, can be overcome by using localized modes instead of the commonly employed normal modes. We apply such local vibrational self‐consistent field (<sc>L</sc>‐VSCF) and vibrational configuration interaction (<sc>L</sc>‐VCI) calculations to a cyclic water tetramer and a helical hexa‐alanine peptide. The results show that the use of localized modes is equivalent to the commonly used normal modes, but offers several advantages. First, a faster convergence with respect to the excitation level is observed in <sc>L</sc>‐VCI calculations. Second, the localized modes provide a reduced representation of the couplings between modes that show a regular coupling pattern. This can be used to disregard a significant number of small two‐mode potentials a priori. Several such reduced coupling approximations are explored, and we show that the number of single‐point calculations required to evaluate the potential energy surface can be significantly reduced without introducing noticeable errors in the resulting vibrational spectra.</p> </abstract>
- Is Part Of:
- Chemphyschem. Volume 15:Issue 15(2014)
- Journal:
- Chemphyschem
- Issue:
- Volume 15:Issue 15(2014)
- Issue Display:
- Volume 15, Issue 15 (2014)
- Year:
- 2014
- Volume:
- 15
- Issue:
- 15
- Issue Sort Value:
- 2014-0015-0015-0000
- Page Start:
- 3365
- Page End:
- 3377
- Publication Date:
- 2014-07-30
- Subjects:
- Chemistry, Physical and theoretical -- Periodicals
541.05 - Journal URLs:
- http://onlinelibrary.wiley.com/journal/10.1002/(ISSN)1439-7641 ↗
http://onlinelibrary.wiley.com/ ↗ - DOI:
- 10.1002/cphc.201402251 ↗
- Languages:
- English
- ISSNs:
- 1439-4235
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 3172.310500
British Library DSC - BLDSS-3PM
British Library STI - ELD Digital store - Ingest File:
- 3457.xml