Automatic segmentation of invasive breast carcinomas from dynamic contrast‐enhanced MRI using time series analysis. Issue 2 (23rd September 2013)

• Record Type: Journal Article
• Authors: Jayender, Jagadaeesan; Chikarmane, Sona; Jolesz, Ferenc A.; Gombos, Eva
• Is Part Of: Journal of magnetic resonance imaging. Volume 40:Issue 2(2014)
• Page Start: 467
• Page End: 475
• Publication Date: 2013-09-23
• Subjects: Magnetic resonance imaging -- Periodicals; 616
• DOI: 10.1002/jmri.24394
• Languages: English
• ISSNs: 1053-1807

Abstract

<abstract abstract-type="main"> <title> <x xml:space="preserve">Abstract</x> </title> <sec id="jmri24394-sec-0001" sec-type="section"> <title>Purpose</title> <p>To accurately segment invasive ductal carcinomas (IDCs) from dynamic contrast‐enhanced MRI (DCE‐MRI) using time series analysis based on linear dynamic system (LDS) modeling.</p> </sec> <sec id="jmri24394-sec-0002" sec-type="section"> <title>Materials and Methods</title> <p>Quantitative segmentation methods based on black‐box modeling and pharmacokinetic modeling are highly dependent on imaging pulse sequence, timing of bolus injection, arterial input function, imaging noise, and fitting algorithms. We modeled the underlying dynamics of the tumor by an LDS and used the system parameters to segment the carcinoma on the DCE‐MRI. Twenty‐four patients with biopsy‐proven IDCs were analyzed. The lesions segmented by the algorithm were compared with an expert radiologist's segmentation and the output of a commercial software, CADstream. The results are quantified in terms of the accuracy and sensitivity of detecting the lesion and the amount of overlap, measured in terms of the Dice similarity coefficient (DSC).</p> </sec> <sec id="jmri24394-sec-0003" sec-type="section"> <title>Results</title> <p>The segmentation algorithm detected the tumor with 90% accuracy and 100% sensitivity when compared with the radiologist's segmentation and 82.1% accuracy and 100% sensitivity when compared with the CADstream output. The overlap of the algorithm output with the radiologist's segmentation and CADstream output, computed in terms of the DSC was 0.77 and 0.72, respectively. The algorithm also shows robust stability to imaging noise. Simulated imaging noise with zero mean and standard deviation equal to 25% of the base signal intensity was added to the DCE‐MRI series. The amount of overlap between the tumor maps generated by the LDS‐based algorithm from the noisy and original DCE‐MRI was DSC = 0.95.</p> </sec> <sec id="jmri24394-sec-0004" sec-type="section"> <title>Conclusion</title> <p>The time‐series analysis based segmentation algorithm provides high accuracy and sensitivity in delineating the regions of enhanced perfusion corresponding to tumor from DCE‐MRI. <bold>J. Magn. Reson. Imaging 2014;40:467–475</bold>. © <bold>2013 Wiley Periodicals, Inc</bold>.</p> </sec> </abstract>