Structural analysis of the Rhizoctonia solani agglutinin reveals a domain‐swapping dimeric assembly. (7th March 2013)

• Record Type: Journal Article
• Authors: Skamnaki, Vassiliki T.; Peumans, Willy J.; Kantsadi, Anastassia L.; Cubeta, Marc A.; Plas, Kirsten; Pakala, Suman; Zographos, Spyridon E.; Smagghe, Guy; Nierman, William C.; Van, Els J. M.; Leonidas, Demetres D.
• Is Part Of: FEBS journal. Volume 280:Number 8(2013)
• Page Start: 1750
• Page End: 1763
• Publication Date: 2013-03-07
• Subjects: Biochemistry -- Periodicals; Molecular biology -- Periodicals; Pathology, Molecular -- Periodicals; 572
• DOI: 10.1111/febs.12190
• Languages: English
• ISSNs: 1742-464X

Abstract

<abstract abstract-type="main" xml:lang="en" id="febs12190-abs-0001"> <title> <x xml:space="preserve">Abstract</x> </title> <sec id="febs12190-sec-0001" sec-type="section"> <p> <italic>Rhizoctonia solani</italic> agglutinin (RSA) is a 15.5‐kDa lectin accumulated in the mycelium and sclerotia of the soil born plant pathogenic fungus <italic>R. solani</italic>. Although it is considered to serve as a storage protein and is implicated in fungal insecticidal activity, its physiological role remains unclear as a result of a lack of any structure/function relationship information. Glycan arrays showed that RSA displays high selectivity towards terminal nonreducing <italic>N</italic>‐acetylgalactosamine residues. We determined the amino acid sequence of RSA and also determined the crystal structures of the free form and the RSA–<italic>N</italic>‐acetylgalactosamine complex at 1.6 and 2.2 Å resolution, respectively. RSA is a homodimer comprised of two monomers adopting the β‐trefoil fold. Each monomer accommodates two different carbohydrate‐binding sites in an asymmetric way. Despite RSA topology similarities with R‐type lectins, the two‐monomer assembly involves an N‐terminal swap, thus creating a dimer association novel to R‐type lectins. Structural characterization of the two carbohydrate‐binding sites offers insights on the structural determinants of the RSA carbohydrate specificity.</p> </sec> <sec id="febs12190-sec-0002" sec-type="section"> <title>Database</title> <p>Structural data have been deposited in the Protein Data Bank database under accession numbers 4G9M and 4G9N.</p> </sec> <sec id="febs12190-sec-0003" sec-type="section"> <title>Structured digital abstract</title> <p>RSA and RSA bind by x-ray crystallography (View interaction)</p> </sec> </abstract>