Advances in bioinformatics and computational biology 12th Brazilian Symposium on Bioinformatics, BSB 2019, Fortaleza, Brazil, October 7-10, 2019, Revised selected papers /: 12th Brazilian Symposium on Bioinformatics, BSB 2019, Fortaleza, Brazil, October 7-10, 2019, Revised selected papers. (2020)

• Record Type: Book
• Other Titles: BSB 2019
• Further Information: Note: Luis Kowada, Daniel de Oliveira (eds.).
• Other Names: Kowada, Luis; (Professor of computer science), Oliveira, Daniel de; Brazilian Symposium on Bioinformatics, 12th
• Contents: Intro -- Preface -- Organization -- Contents -- Full Papers -- On Clustering Validation in Metagenomics Sequence Binning -- 1 Introduction -- 2 On Clustering Metagenomic Data -- 3 Clusters Validation -- 4 Quantitative Validation (Internal Indexes) -- 5 Qualitative Validation -- 6 Experimental Study -- 6.1 Data Sets -- 6.2 Methods -- 7 Results and Discussion -- 7.1 Quantitative Validation -- 7.2 Qualitative Validation -- 8 Conclusion -- References -- Genome Assembly Using Reinforcement Learning -- 1 Introduction -- 2 Background -- 2.1 ML-Based Genome Assembly -- 2.2 RL-Based Auto-assembly 3 Materials and Methods -- 3.1 Read Simulation -- 3.2 Overlapping Scores and Ground Truth Acquisition -- 3.3 RL-Based Auto-Assembly Implementation -- 4 Results and Discussion -- 5 Conclusion -- References -- GeNWeMME: A Network-Based Computational Method for Prioritizing Groups of Significant Related Genes in Cancer -- 1 Introduction -- 2 Related Work -- 3 Biological Concepts -- 4 GeNWeMME Method -- 5 Results -- 6 Conclusion -- References -- MDR SurFlexDock: A Semi-automatic Webserver for Discrete Receptor-Ensemble Docking -- 1 Background -- 2 Implementation -- 2.1 Web Server -- 2.2 Pipeline 3 Results and Discussion -- 4 Perspectives -- References -- Venom Gland Peptides of Arthropods from the Brazilian Cerrado Biome Unveiled by Transcriptome Analysis -- 1 Introduction -- 2 Methods -- 2.1 Filtering and Assembly -- 2.2 Annotation -- 3 Results and Discussion -- 4 Conclusion -- References -- Block-Interchange Distance Considering Intergenic Regions -- 1 Introduction -- 2 Formal Definition of Intergenic Regions -- 3 The Weighted Cycle Graph Structure -- 4 The Block-Interchange Problem -- 5 A 2-Approximation Algorithm -- 6 Considering Insertions and Deletions -- 7 Conclusion -- References K-mer Mapping and RDBMS Indexes -- 1 Introduction -- 2 Related Work -- 3 Index Structures -- 4 Results and Discussion -- 4.1 The Impact of k Value in the Processing Time -- 5 Conclusions -- References -- A Clustering Approach to Identify Candidates to Housekeeping Genes Based on RNA-seq Data -- 1 Introduction -- 2 Related Work -- 3 Methods -- 3.1 Proposed Pipeline for HKG Identification -- 3.2 Data Processing -- 3.3 Clustering -- 3.4 HKGs Candidates Identification -- 4 Results and Discussion -- 5 Conclusion -- References -- Predicting Cancer Patients' Survival Using Random Forests 1 Introduction -- 2 Exploring the Database -- 3 Machine Learning Application -- 3.1 Random Forests -- 3.2 Preprocessing -- 3.3 Training and Testing -- 4 Conclusion -- References -- Extended Abstracts -- Searching in Silico Novel Targets for Specific Coffee Rust Disease Control -- 1 Introduction -- 2 Methods -- 3 Results and Discussion -- 4 Conclusion -- References -- A Domain Framework Approach for Quality Feature Analysis of Genome Assemblies -- 1 The Quality Problem of Assemblies -- 2 Framework Approach -- 2.1 Requirements -- 2.2 Architecture -- 2.3 Extending Abstract Classes
• Publisher Details: Cham : Springer
• Publication Date: 2020
• Extent: 1 online resource (137 p.)
• Subjects: 570.285; Bioinformatics -- Congresses; Computational biology -- Congresses; Bioinformatics; Computational biology; Electronic books; Electronic books; Conference papers and proceedings
• Languages: English
• ISBNs: 9783030464172; 3030464172
• Related ISBNs: 9783030464165
• Notes: Note: Includes bibliographical references and author index.
• Access Rights: Legal Deposit; Only available on premises controlled by the deposit library and to one user at any one time; The Legal Deposit Libraries (Non-Print Works) Regulations (UK).
• Access Usage: Restricted: Printing from this resource is governed by The Legal Deposit Libraries (Non-Print Works) Regulations (UK) and UK copyright law currently in force.