Computer optimized microscopy : methods and protocols /: methods and protocols. (2019)

• Record Type: Book
• Further Information: Note: Edited by Elena Rebollo, Manel Bosch.
• Editors: Rebollo, Elena; Bosch, Manel
• Contents: Preface...Table of Contents...Contributing Authors... Part I Overview 1. Main Steps in Image Processing and Quantification: The Analysis WorkflowJosé F. Pertusa and Jose M. Morante-Redolat 2. Open Source Tools for Biological Image AnalysisRomain Guiet, Olivier Burri, and Arne Seitz Part II Methods Based on ImageJ Macro Programming 3. Proximity Ligation Assay Image Analysis Protocol: Addressing Receptor-Receptor InteractionsMarc López-Cano, Víctor Fernández-Dueñas, and Francisco Ciruela 4. Introduction to ImageJ Macro Language in a Particle Counting Analysis: Automation MattersManel Bosch 5. Automated Macro Approach to Quantify Synapse Density in 2D Confocal Images from Fixed Immunolabeled Neural Tissue SectionsE. Rebollo, J. Boix-Fabrés, and M.L. Arbones 6. Automated Quantitative Analysis of Mitochondrial MorphologyAnna Bosch and María Calvo 7. Structure and Fluorescence Intensity Measurements in BiofilmsBertrand Cinquin and Filipa Lopes 8. 3D+Time Imaging and Image Reconstruction of Pectoral Fin during Zebrafish EmbryogenesisHanh Nguyen, Jaume Boix-Fabrés, Nadine Peyriéras, and Elena Kardash 9. Automated Macro Approach to Remove Vitelline Membrane Autofluorescence in Drosophila Embryo 4D MoviesJ. Boix-Fabrés, K. Karkali, E. Martin-Blanco, and E. Rebollo 10. Which Elements to Build Co-Localization Workflows? From Metrology to AnalysisPatrice Mascalchi and Fabrice P. Cordelières 11. A Triple Colocalization Approach to Assess Traffic Patterns and their ModulationDaniel Sastre, Irene Estadella, Manel Bosch, and Antonio Felipe 12. Photobleaching and Sensitized Emission Based Methods for the Detection of Förster Resonance Energy TransferTimo Zimmermann 13. In Vivo Quantification of Intramolecular FRET using RacFRET Biosensors Manel Bosch and Elena Kardash 14. Cell Proliferation High-Content Screening on Adherent Cell CulturesPau Carrillo-Barberà, Jose M. Morante-Redolat, and José F. Pertusa 15. HCS Methodology for Helping in Lab Scale Image-Based AssaysJ. Soriano, G. Mata, and D. Megias Part III Methods Based on ImageJ Plugin Development 16. Filopodia Quantification using FiloQuantGuillaume Jacquemet, Hellyeh Hamidi, and Johanna Ivaska 17. Coincidence Analysis of Molecular Dynamics by Raster Image CorrelationDavid F. Moreno and Martí Aldea 18. 3D Tracking of Migrating Cells from Live Microscopy Time-LapsesSébastien Tosi and Kyra Campbell Part IV Methods Based on Machine Learning 19. A Cell Segmentation/Tracking Tool Based on Machine LearningHeather S. Deter, Marta Dies, Courtney C. Cameron, Nicholas C. Butzin, and Javier Buceta 20. 2D+Time Object Tracking using Fiji and ilastikAndrea Urru, Miguel Angel González Ballester, and Chong Zhang 21. Machine Learning: Advanced Image Segmentation using ilastikAnna Kreshuk and Chong Zhang.
• Publisher Details: New York, NY : Humana Press
• Publication Date: 2019
• Extent: 1 online resource (xi, 467 pages), illustrations (some color)
• Subjects: 502.8/2; Microscopy -- Laboratory manuals; Electronic books
• Languages: English
• ISBNs: 9781493996865
• Related ISBNs: 149399686X; 9781493996858
• Notes: Note: Online resource; title from PDF title page (SpringerLink, viewed September 11, 2019).
• Access Rights: Legal Deposit; Only available on premises controlled by the deposit library and to one user at any one time; The Legal Deposit Libraries (Non-Print Works) Regulations (UK).
• Access Usage: Restricted: Printing from this resource is governed by The Legal Deposit Libraries (Non-Print Works) Regulations (UK) and UK copyright law currently in force.