Computational stem cell biology : methods and protocols /: methods and protocols. (2019)

• Record Type: Book
• Further Information: Note: Edited by Patrick Cahan.
• Editors: Cahan, Patrick
• Contents: Preface…Table of Contents…Contributing Authors… Part I Modeling 1. Agent-Based Modeling to Delineate Spatiotemporal Control Mechanisms of the Stem Cell NicheRobert Mines, Kai-Yuan Chen, and Xiling Shen 2. Modeling Cellular Differentiation and Reprogramming with Gene Regulatory NetworksAndrás Hartmann, Srikanth Ravichandran, and Antonio del Sol 3. Cell Population Model to Track Stochastic Cellular Decision-Making during Differentiation Keith Task and Ipsita Banerjee 4. Automated Formal Reasoning to Uncover Molecular Programs of Self-RenewalSara-Jane Dunn 5. Mathematical Modeling of Clonal Stem Cell DynamicsPhilip Greulich 6. Computational Tools for Quantifying Concordance in Single Cell FateJ.A. Cornwell and R.E. Nordon 7. Quantitative Modeling of the Waddington Epigenetic LandscapeAtefeh Taherian Fard and Mark A. Ragan 8. Modeling Gene Networks to Understand Multistability in Stem CellsDavid Menn and Xiao Wang Part II Single Cell Approaches 9. Trajectory Algorithms to Infer Stem Cell Fate DecisionsEdroaldo Lummertz da Rocha and Mohan Malleshaiah 10. Gene Regulatory Networks from Single Cell Data for Exploring Cell Fate DecisionsThalia E. Chan, Michael P.H. Stumpf, and Ann C. Babtie 11. Reconstructing Gene Regulatory Networks that Control Hematopoietic CommitmentFiona K. Hamey and Berthold Göttgens 12. Investigating Cell Fate Decisions with ICGS Analysis of Single CellsNathan Salomonis 13. Lineage Inference and Stem Cell Identity Prediction using Single Cell RNA-Sequencing DataSagar and Dominic Grün Part III Metabolism 14. Dynamic Network Modeling of Stem Cell MetabolismFangzhou Shen, Camden Cheek, and Sriram Chandrasekaran 15. Metabolomics in Stem Cell Biology ResearchSun Zhen, Jing Zhao, Hua Yu, Chenyang Zhang, Hu Li, Zhongda Zeng, and Jin Zhang Part IV Assessing and Improving Cell Fate Engineering 16. Molecular Interaction Networks to Select Factors for Cell ConversionJohn F. Ouyang, Uma S. Kamaraj, Jose M. Polo, Julian Gough, and Owen J. L. Rackham 17. A Computational Approach for Cell Fate ReprogrammingHussein M. Abdallah and Domitilla Del Vecchio 18. Computational Analysis of Aneuploidy in Pluripotent Stem CellsUri Weissbein 19. Cell Fate Engineering Tools for iPSC Disease ModelingEmily K. W. Lo and Patrick Cahan.
• Publisher Details: New York, NY : Humana Press
• Publication Date: 2019
• Extent: 1 online resource (xi, 456 pages), illustrations (some color)
• Subjects: 616.02/774; Stem cells -- Computer simulation -- Laboratory manuals; Computational biology -- Laboratory manuals; Electronic books
• Languages: English
• ISBNs: 9781493992249; 1493992244
• Related ISBNs: 9781493992232
• Notes: Note: Online resource; title from PDF title page (SpringerLink, viewed May 16, 2019).
• Access Rights: Legal Deposit; Only available on premises controlled by the deposit library and to one user at any one time; The Legal Deposit Libraries (Non-Print Works) Regulations (UK).
• Access Usage: Restricted: Printing from this resource is governed by The Legal Deposit Libraries (Non-Print Works) Regulations (UK) and UK copyright law currently in force.