Statistical genomics : methods and protocols /: methods and protocols. (2016)

• Record Type: Book
• Further Information: Note: Edited by Ewy Mathé, Sean Davis.
• Editors: Mathe, Ewy A; Davis, Sean
• Contents: Overview of Sequence Data Formats -- Integrative Exploratory Analysis of Two or More Genomic Datasets -- Study Design for Sequencing Studies -- Genomic Annotation Resources in R/Bioconductor -- The Gene Expression Omnibus Database -- A Practical Guide to the Cancer Genome Atlas (TCGA) -- Working with Oligonucleotide Arrays -- Meta-Analysis in Gene Expression Studies -- Practical Analysis of Genome Contact Interaction Experiments -- Quantitative Comparison of Large-Scale DNA Enrichment Sequencing Data -- Variant Calling From Next Generation Sequence Data -- Genome-Scale Analysis of Cell-Specific Regulatory Codes Using Nuclear Enzymes -- NGS-QC Generator: A Quality Control System for ChIP-seq and Related Deep Sequencing-Generated Datasets -- Operating on Genomic Ranges Using BEDOPS -- GMAP and GSNAP for Genomic Sequence Alignment: Enhancements to Speed, Accuracy, and Functionality -- Visualizing Genomic Data using Gviz and Bioconductor -- Introducing Machine Learning Concepts with WEKA -- Experimental Design and Power Calculation for RNA-Seq Experiments -- It{u2019}s DE-licious: A Recipe for Differential Expression Analyses of RNA-Seq Experiments Using Quasi-Likelihood Methods in EdgeR.
• Publisher Details: New York, NY : Humana Press
• Publication Date: 2016
• Extent: 1 online resource (xi, 418 pages), illustrations (some color)
• Subjects: 576.5072/7; Medicine; Genomics -- Statistical methods -- Laboratory manuals; Genomics -- Statistical methods; Genomics -- statistics & numerical data; Data Interpretation, Statistical; Databases, Genetic -- statistics & numerical data; Human genetics; Medical -- Genetics; Medical genetics; Electronic books; Laboratory manuals; Electronic books
• Languages: English
• ISBNs: 9781493935789; 1493935763; 9781493935765
• Related ISBNs: 149393578X; 9781493935765
• Notes: Note: Includes bibliographical references and index.; Note: Online resource; title from PDF title page (SpringerLink, viewed March 30, 2016).
• Access Rights: Legal Deposit; Only available on premises controlled by the deposit library and to one user at any one time; The Legal Deposit Libraries (Non-Print Works) Regulations (UK).
• Access Usage: Restricted: Printing from this resource is governed by The Legal Deposit Libraries (Non-Print Works) Regulations (UK) and UK copyright law currently in force.