Computational protein design. (2016)
- Record Type:
- Book
- Title:
- Computational protein design. (2016)
- Main Title:
- Computational protein design
- Further Information:
- Note: Edited By Ilan Samish.
- Editors:
- Samish, Ilan
- Contents:
- Part I: Computational Protein Design1. The Framework of Computational Protein DesignIlan Samish2. Achievements and Challenges in Computational Protein DesignIlan Samish3. Production of Computationally Designed Small Soluble- and Membrane-Proteins: Cloning, Expression and PurificationBarsha Tripathy and Rudresh Acharya4. Deterministic Search methods for Computational Protein DesignSeydou Traoré, David Allouche, Isabelle André Thomas Schiex, and Sophie Barbe5. Geometric Potentials for Computational Protein Sequence DesignJie Li and Patrice Koehl6. Modeling Binding Affinity of Pathological Mutations for Computational Protein DesignMiguel Romero-Durana, Chiara Pallara, Fabian Glaser, and Juan Fernández-Recio7. Multistate Computational Protein Design with Backbone EnsemblesJames A. Davey and Roberto A. Chica8. Integration of Molecular Dynamics Based Predictions into the Optimization of de novo Protein Designs: Limitations and BenefitsHenrique F. Carvalho, Arménio J. M. Barbosa, Ana C. A. Roque, Olga Iranzo, and Ricardo J. F. Branco9. Applications of Normal Mode Analysis Methods in Computational Protein DesignVincent Frappier, Matthieu Chartier, and Rafael NajmanovichPart II: Software of Computational Protein Design Applications10. Computational Protein Design Under a Given backbone Structure with a Statistical Energy FunctionPeng Xiong, Quan Chen, and Haiyan Liu11. Computational Protein Design Through Grafting and StabilizationCheng Zhu, David D. Mowrey, and Nikolay V.Part I: Computational Protein Design1. The Framework of Computational Protein DesignIlan Samish2. Achievements and Challenges in Computational Protein DesignIlan Samish3. Production of Computationally Designed Small Soluble- and Membrane-Proteins: Cloning, Expression and PurificationBarsha Tripathy and Rudresh Acharya4. Deterministic Search methods for Computational Protein DesignSeydou Traoré, David Allouche, Isabelle André Thomas Schiex, and Sophie Barbe5. Geometric Potentials for Computational Protein Sequence DesignJie Li and Patrice Koehl6. Modeling Binding Affinity of Pathological Mutations for Computational Protein DesignMiguel Romero-Durana, Chiara Pallara, Fabian Glaser, and Juan Fernández-Recio7. Multistate Computational Protein Design with Backbone EnsemblesJames A. Davey and Roberto A. Chica8. Integration of Molecular Dynamics Based Predictions into the Optimization of de novo Protein Designs: Limitations and BenefitsHenrique F. Carvalho, Arménio J. M. Barbosa, Ana C. A. Roque, Olga Iranzo, and Ricardo J. F. Branco9. Applications of Normal Mode Analysis Methods in Computational Protein DesignVincent Frappier, Matthieu Chartier, and Rafael NajmanovichPart II: Software of Computational Protein Design Applications10. Computational Protein Design Under a Given backbone Structure with a Statistical Energy FunctionPeng Xiong, Quan Chen, and Haiyan Liu11. Computational Protein Design Through Grafting and StabilizationCheng Zhu, David D. Mowrey, and Nikolay V. Dokholyan12. An Evolution Based Approach to de novo Protein DesignJeffrey R. Brender, David Shultis, Naureen Aslam, and Yang Zhang13. Parallel Computational Protein DesignYichao Zhou, Bruce R. Donald, and Jianyang Zeng14. BindML/BindML+: Detecting Protein-Protein Interaction Interface Propensity from Amino Acid Substitution PatternsQing Wei, David La, and Daisuke Kihara15. OSPREY Predicts Resistance Mutations using Positive and Negative Computational Protein DesignAdegoke Ojewole, Anna Lowegard, Pablo Gainza, Stephanie M. Reeve, Ivelin Georgiev, Amy C. Anderson, and Bruce R. DonaldPart III: Computational Protein Design of Specific Targets16. Evolution-inspired Computational Design of Symmetric ProteinsArnout R.D. Voet, David Simoncini, Jeremy R.H. Tame, and Kam Y. J. Zhang17. A Protocol for the Design of Protein and Peptide Nanostructure Self-assemblies Exploiting Synthetic Amino Acids<Nurit Haspel, Jie Zheng, Carlos Aleman, David Zanuy, and Ruth Nussinov18. Probing Oligomerized Conformations of Defensin in the MembraneWenxun Gan, Dina Schneidman, Ning Zhang, Buyong Ma, and Ruth Nussinov19. Computational Design of Ligand Binding ProteinsChristine E. Tinberg and Sagar D. Khare20. EpiSweep: Computationally-driven Reengineering of Therapeutic Proteins to Reduce Immunogenicity while Maintaining FunctionYoonjoo Choi, Deeptak Verma, Karl E. Griswold, and Chris Bailey-Kellogg21. Computational Tools for Aiding Rational Antibody DesignKonrad Krawczyk, James Dunbar, and Charlotte M Deane22. Computational Design of Membrane Curvature-Sensing PeptidesArmando Jerome de Jesus and Hang Yin23. Computational Tools for Allosteric Drug Discovery: Site Identification and Focus Library DesignWenkang Huang, Ruth Nussinov, and Jian Zhang. … (more)
- Publisher Details:
- New York : Humana Press
- Publication Date:
- 2016
- Copyright Date:
- 2017
- Extent:
- 1 online resource (450 pages)
- Subjects:
- 572.645
Life sciences
Protein engineering -- Software
Bioinformatics
Biochemistry
Science -- Life Sciences -- Biochemistry
Proteins - Languages:
- English
- ISBNs:
- 9781493966370
- Related ISBNs:
- 9781493966356
- Access Rights:
- Legal Deposit; Only available on premises controlled by the deposit library and to one user at any one time; The Legal Deposit Libraries (Non-Print Works) Regulations (UK).
- Access Usage:
- Restricted: Printing from this resource is governed by The Legal Deposit Libraries (Non-Print Works) Regulations (UK) and UK copyright law currently in force.
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library HMNTS - ELD.DS.360299
- Ingest File:
- 01_322.xml