Genome annotation. (2013)

• Record Type: Book
• Further Information: Note: Paul M.K. Gordon, Christoph W. Sensen and Jung Soh.
• Other Names: Gordon, Paul M. K; Sensen, C. W (Christoph W.); Soh, Jung
• Contents: DNA Sequencing Strategies; The Evolution of DNA Sequencing Technologies; DNA Sequence Assembly Strategies; Next-Generation Sequencing; Sequencing Bias and Error Rates Coding Sequence Prediction ; Introduction; Mapping Messenger RNA (mRNA); Statistical Models; Cross-Species Methods; Combining Gene Predictions; Splice Variants Between the Genes ; Introduction; Transcription Factors; RNA; Pseudogenes; Other Repeats Genome-Associated Data; Introduction; Operons; Metagenomics; Individual Genomes Characterization of Gene Function through Bioinformatics: The Early Days; Overview; Stand-Alone Tools and Tools for the Early Internet; Packages; From FASTA Files to Annotated Genomes; Conclusion Visualization Techniques and Tools for Genomic Data ; Introduction; Visualization of Sequencing Data; Visualization of Multiple Sequence Alignments; Visualization of Hierarchical Structures; Visualization of Gene Expression Data Functional Annotation ; Introduction; Biophysical and Biochemical Feature; Prediction; Protein Domains; Similarity Searches; Pairwise Alignment Methods; Conclusion Automated Annotation Systems; Introduction; MAGPIE; Generic Model Organism Database (GMOD); AGeS; Ensembl; Summary Dynamic Annotation Systems: End-User-Driven Annotation and Visualization ; Introduction; Web-Based Genome Annotation Browsers; Stand-Alone Genome Annotation Browsers; Comparative Visualization of Genomes Web-Based Workflows ; Introduction; Principles of Web-Based Workflows; Galaxy; Taverna; Seahawk; Conclusion Analysis Pipelines for Next-Generation Sequencing Data; Introduction; Genome Sequence Reconstruction; Analysis Pipelines: Case Studies; Next-Generation Genome Browsing Index References appear at the end of each chapter.
• Publisher Details: Boca Raton, Fla London : Chapman & Hall/CRC
• Publication Date: 2013
• Extent: 1 online resource, illustrations
• Subjects: 572.860285; Human genome; Genomics -- Data processing; Computational biology; Bioinformatics; Molecular Sequence Annotation -- methods; Genomics; Sequence Analysis, DNA -- methods; SCIENCE -- Life Sciences -- Genetics & Genomics; Bioinformatics; Computational biology; Genomics -- Data processing; Human genome; Electronic books
• Languages: English
• ISBNs: 9781439841181; 1439841187
• Related ISBNs: 9781439841174; 1439841179
• Notes: Note: Includes bibliographical references.; Note: Print version record.
• Access Rights: Legal Deposit; Only available on premises controlled by the deposit library and to one user at any one time; The Legal Deposit Libraries (Non-Print Works) Regulations (UK).
• Access Usage: Restricted: Printing from this resource is governed by The Legal Deposit Libraries (Non-Print Works) Regulations (UK) and UK copyright law currently in force.