Automated DNA sequencing and analysis. (2009)

• Record Type: Book
• Further Information: Note: Edited by Mark D. Adams, Chris Fields, J. Craig Venter.
• Other Names: Adams, Mark D; Fields, Chris; Venter, J. Craig
• Contents: Sequencing Instruments and Strategies: ; E. Chen, The Efficiency of Automated DNA Sequencing; G.M. Church, G. Gryan, N. Lakey, S. Kieffer-Higgins, L. Mintz, M. Temple, M. Rubenfield, L. Jaehn, H. Ghazizadel, K. Robison, and P. Richterick, Automated Multiplex Sequencing; X.C. Huang and R.A. Mathies, Application of Capillary Array Electrophoresis to DNA Sequencing; R. Drmanac, S. Drmanac, J. Jarvis, and I. Labat, Sequencing by Hybridization; A. Martin-Gallardo, J. Lamerdin, and A. Carrano, Shotgun Sequencing; A. Bodenteich, S. Chissoe, Y.-F. Wang, and B. Roe, Shotgun Cloning as the Strategy of Choice to Generate Templates for High Throughput Dideoxynucleotide Sequencing; C.M. Berg, G. Wang, K. Isono, H. Kasai, and D.E. Berg, Transposon-Facilitated Large-Scale DNA Sequencing; C.H. Martin, C.A. Mayeda, C.A. Davis, M.P. Strathmann, and M. Palazzolo, Transposon-Facilitated Sequencing: An Effective Set of Procedures to Sequence DNA Fragments Smaller than 4kb; L. Liu and R.D. Fleischmann, Construction of Exonuclease III Nested Deletion Sets for Rapid DNA Sequencing; M. Adams, Expressed Sequence Tags as Tools for Physiology and Genomics; W.R. McCombie, The Use of Automated DNA Sequencing in the Analysis of cDNAs of Model Organisms; Sample Preparation and Sequencing Methods: Libraries: ; R.L. Stalligs, N.A. Doggett, A. Ford, J. Longmire, C.E. Hildebrand, L.L. Deaven, and R. Moyzis, Applications of Cosmid Libraries in Genome Mapping and Sequencing Efforts; D.A. Smoller, W.J. Kimmerly, O. Hubbard, C. Ericsson, C.H. Martin, and M.J. Palazzolo, A Role for the P1 Cloning System in Genome Analysis; N.A. Doggett, D.L. Grady, J.L. Longmire, and L.L. Deaven, Generation and Mapping of Chromosome Specific Sequence-Tagged Sites (STS); R. Moreno and R. Fuldner, Construction of cDNA Libraries; M.B. Soares, Construction of Directionally Cloned cDNA Libraries and Phagemid Vectors; A. Swaroop, Construction of Directional cDNA Libraries; J.M. Kwak and J.G. Nam, Preparation of cDNA Libraries from Brassica; J.M. Sikela, T.J. Stevens, J.A. Hopkins, A.S. Wilcox, J. Glod, A.S. Khan, and A.K. Orpana, Abundance Screening of Human cDNA Libraries; G. Lennon, High Density Grid Technologies; Automated Sample Preparation: ; D.R. Sibson, Solid Phrase Preparation of Sequencing Templates from PCR Products; A. Holmberg, G. Fry, and M. Uhlon, Automatic Preparation of DNA Templatesfor Sequencing on the ABI Catalyst Robotic Workstation; T. Hawkins, Custom Magnetic Particles: Their Use in DNA Purification; Sequencing Methods: ; W.R. McCombie and A. Martin-Gallardo, Large-Scale Automated Sequencing of Human Chromosomal Regions; L. Rowen and B.F. Koop, Zen and the Art of Large-Scale Genomic Sequencing; J.M. Kelley, Automated Dye Terminator DNA Sequencing; D.M. Muzny, S. Richards, Y. Shen, and R.A. Gibbs, PCR Based Strategies for Gap Closure in Large Scale Sequencing Projects; S. Richards, D.M. Muzny, A.B. Civitello, F. Lu, and R.A. Gibbs, Sequence Map Gaps and Directed Reverse Sequencing for the Completion of Large Sequencing Projects; F. Iris, Optimized Methods for Large-Scale Shotgun DNASequencing in Alu-Rich Genomic Regions; S.G. Burgett and P.R. Rosteck, Jr., Use of Dimethylsulfoxide to Improve Fluorescent, Tag Cycle Sequencing; Informatics: Sequence Assembly Theory and Algorithms: ; C. Tibbetts, J.M. Bowling, and J.B. Golden, III, Neural Networks for Automated Base Calling of Gel Based DNA Sequencing Ladders; G. Myers, Advances in Sequence Assembly; S. Honda, N.W. Parrott, and C.B. Lawrence, Computer Aided Sequence Reconstruction: Software Support for Multiple Large-Scale Sequencing Strategies; C. Burks, M.L. Engle, S. Forrest, R.J. Parsons, C.A. Soderlund, and P.E. Stolorz, Relaxation and Optimization Methods for Sequence Assembly; Data Analysis Tools: ; G. Sutton and T. Kerlavage, Software Tools for Protein Similarity Searching; J.M. Claverie, Large-Scale Sequence Analysis; J. Shavlik, Finding Frame Shift Errors in Anonymous DNA; B. Rappaport, J. Gatewood, C. Fields, and N. Doggett, Integrating Repeat Identification withThermal Calculations; J. Jurka, Approaches to Identification and Analysis of Interspersed Repetitive DNA Sequences; O. White and T. Dunning, Compositional Properties of Exons and Introns; E.C. Uberbacher, X. Guan, and R.J. Mural, A Practical Guide to the GRAIL Email Server; S. Henikoff, J. Henikoff, S. Agus, and J.C. Wallace, Searching for Homologies to Protein Blocks by Electronic Mail; C. Fields, Integrating Computational and Experimental Methods; Data Management and Databases: ; S. Lewis, Design Issues in Developing Laboratory Information Management Systems; J. Cuticchia, A Relational Database Primer for Molecular Biologists; J.M. Cherry and S.W. Cartinhour, ACEDB: A Tool for Biological Information; R. Overbeek and M. Price, The Integration of Curated Biological Databases.
• Publisher Details: London San Diego, California : Academic Press
• Publication Date: 2009
• Copyright Date: 1994
• Extent: 1 online resource (389 pages), illustrations
• Subjects: 574.8732820285; Nucleotide sequence -- Data processing; Information storage and retrieval systems -- Nucleotide sequence; Information storage and retrieval systems -- Nucleotide sequence; Nucleotide sequence -- Data processing; Electronic books
• Languages: English
• ISBNs: 9780080926391; 0080926398
• Related ISBNs: 9780127170107
• Notes: Note: Includes bibliographical references at the end of each chapters and index.; Note: Online resource; title from PDF title page (ebrary, viewed September 18, 2013).
• Access Rights: Legal Deposit; Only available on premises controlled by the deposit library and to one user at any one time; The Legal Deposit Libraries (Non-Print Works) Regulations (UK).
• Access Usage: Restricted: Printing from this resource is governed by The Legal Deposit Libraries (Non-Print Works) Regulations (UK) and UK copyright law currently in force.