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12. AscatNgs: Identifying Somatically Acquired Copy‐Number Alterations from Whole‐Genome Sequencing Data. Issue 1 (8th December 2016)

Authors:
Raine, Keiran M.; Van Loo, Peter; Wedge, David C.; Jones, David; Menzies, Andrew; Butler, Adam P.; Teague, Jon W.; Tarpey, Patrick; Nik‐Zainal, Serena; Campbell, Peter J.
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 56:Issue 1(2016)
Page Start:
15.9.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗

16. CgpCaVEManWrapper: Simple Execution of CaVEMan in Order to Detect Somatic Single Nucleotide Variants in NGS Data. Issue 1 (8th December 2016)

Authors:
Jones, David; Raine, Keiran M.; Davies, Helen; Tarpey, Patrick S.; Butler, Adam P.; Teague, Jon W.; Nik‐Zainal, Serena; Campbell, Peter J.
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 56:Issue 1(2016)
Page Start:
15.10.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗

17. CgpPindel: Identifying Somatically Acquired Insertion and Deletion Events from Paired End Sequencing. Issue 1 (17th December 2015)

Authors:
Raine, Keiran M.; Hinton, Jonathan; Butler, Adam P.; Teague, Jon W.; Davies, Helen; Tarpey, Patrick; Nik‐Zainal, Serena; Campbell, Peter J.
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 52:Issue 1(2015)
Page Start:
15.7.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗