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Date 2016 Subject Databases, Genetic

1. AscatNgs: Identifying Somatically Acquired Copy‐Number Alterations from Whole‐Genome Sequencing Data. Issue 1 (8th December 2016)

Authors:
Raine, Keiran M.; Van Loo, Peter; Wedge, David C.; Jones, David; Menzies, Andrew; Butler, Adam P.; Teague, Jon W.; Tarpey, Patrick; Nik‐Zainal, Serena; Campbell, Peter J.
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 56:Issue 1(2016)
Page Start:
15.9.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗

2. CgpCaVEManWrapper: Simple Execution of CaVEMan in Order to Detect Somatic Single Nucleotide Variants in NGS Data. Issue 1 (8th December 2016)

Authors:
Jones, David; Raine, Keiran M.; Davies, Helen; Tarpey, Patrick S.; Butler, Adam P.; Teague, Jon W.; Nik‐Zainal, Serena; Campbell, Peter J.
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 56:Issue 1(2016)
Page Start:
15.10.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗

5. DIANA‐TarBase and DIANA Suite Tools: Studying Experimentally Supported microRNA Targets. Issue 1 (7th September 2016)

Authors:
Paraskevopoulou, Maria D.; Vlachos, Ioannis S.; Hatzigeorgiou, Artemis G.
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 55:Issue 1(2016)
Page Start:
12.14.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗

6. Exploring FlyBase Data Using QuickSearch. Issue 1 (8th December 2016)

Authors:
Marygold, Steven J.; Antonazzo, Giulia; Attrill, Helen; Costa, Marta; Crosby, Madeline A.; dos Santos, Gilberto; Goodman, Joshua L.; Gramates, L. Sian; Matthews, Beverley B.; Rey, Alix J.; Thurmond, Jim
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 56:Issue 1(2016)
Page Start:
1.31.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗

8. Inference of Episodic Changes in Natural Selection Acting on Protein Coding Sequences via CODEML. Issue 1 (20th June 2016)

Authors:
Bielawski, Joseph P.; Baker, Jennifer L.; Mingrone, Joseph
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 54:Issue 1(2016)
Page Start:
6.15.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗

10. MetaboLights: An Open‐Access Database Repository for Metabolomics Data. Issue 1 (24th March 2016)

Authors:
Kale, Namrata S.; Haug, Kenneth; Conesa, Pablo; Jayseelan, Kalaivani; Moreno, Pablo; Rocca‐Serra, Philippe; Nainala, Venkata Chandrasekhar; Spicer, Rachel A.; Williams, Mark; Li, Xuefei; Salek, Reza M.; Griffin, Julian L.; Steinbeck, Christoph
Editors:
Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R.
Journal:
Current protocols in bioinformatics
Issue:
Volume 53:Issue 1(2016)
Page Start:
14.13.1
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗