1. DirectRMDB: a database of post-transcriptional RNA modifications unveiled from direct RNA sequencing technology. Issue Volume 51:Issue D1(2023) (16th November 2022) Authors: Zhang, Yuxin; Jiang, Jie; Ma, Jiongming; Wei, Zhen; Wang, Yue; Song, Bowen; Meng, Jia; Jia, Guifang; de Magalhães, João Pedro; Rigden, Daniel J; Hang, Daiyun; Chen, Kunqi Journal: Nucleic acids research Issue: Volume 51:Issue D1(2023) Page Start: D106 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. GeneFriends: gene co-expression databases and tools for humans and model organisms. Issue Volume 51:Issue D1(2023) (1st December 2022) Authors: Raina, Priyanka; Guinea, Rodrigo; Chatsirisupachai, Kasit; Lopes, Inês; Farooq, Zoya; Guinea, Cristina; Solyom, Csaba-Attila; de Magalhães, João Pedro Journal: Nucleic acids research Issue: Volume 51:Issue D1(2023) Page Start: D145 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Geographic encoding of transcripts enabled high-accuracy and isoform-aware deep learning of RNA methylation. Issue 18 (26th September 2022) Authors: Huang, Daiyun; Chen, Kunqi; Song, Bowen; Wei, Zhen; Su, Jionglong; Coenen, Frans; de Magalhães, João Pedro; Rigden, Daniel J; Meng, Jia Journal: Nucleic acids research Issue: Volume 50:Issue 18(2022) Page Start: 10290 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. M5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome. Issue Volume 50:Issue D1(2022) (19th November 2021) Authors: Ma, Jiongming; Song, Bowen; Wei, Zhen; Huang, Daiyun; Zhang, Yuxin; Su, Jionglong; de Magalhães, João Pedro; Rigden, Daniel J; Meng, Jia; Chen, Kunqi Journal: Nucleic acids research Issue: Volume 50:Issue D1(2022) Page Start: D196 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Rilmenidine extends lifespan and healthspan in Caenorhabditis elegans via a nischarin I1‐imidazoline receptor. Issue 2 (20th January 2023) Authors: Bennett, Dominic F.; Goyala, Anita; Statzer, Cyril; Beckett, Charles W.; Tyshkovskiy, Alexander; Gladyshev, Vadim N.; Ewald, Collin Y.; de Magalhães, João Pedro Journal: Aging cell Issue: Volume 22:Issue 2(2023) Page Start: n/a Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. RMDisease V2.0: an updated database of genetic variants that affect RNA modifications with disease and trait implication. Issue Volume 51:Issue D1(2023) (5th September 2022) Authors: Song, Bowen; Wang, Xuan; Liang, Zhanmin; Ma, Jiongming; Huang, Daiyun; Wang, Yue; de Magalhães, João Pedro; Rigden, Daniel J; Meng, Jia; Liu, Gang; Chen, Kunqi; Wei, Zhen Journal: Nucleic acids research Issue: Volume 51:Issue D1(2023) Page Start: D1388 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. RMDisease: a database of genetic variants that affect RNA modifications, with implications for epitranscriptome pathogenesis. Issue Volume 49:Issue D1(2021) (3rd October 2020) Authors: Chen, Kunqi; Song, Bowen; Tang, Yujiao; Wei, Zhen; Xu, Qingru; Su, Jionglong; de Magalhães, João Pedro; Rigden, Daniel J; Meng, Jia Journal: Nucleic acids research Issue: Volume 49:Issue D1(2021) Page Start: D1396 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. WHISTLE: a high-accuracy map of the human N6-methyladenosine (m6A) epitranscriptome predicted using a machine learning approach. Issue 7 (14th February 2019) Authors: Chen, Kunqi; Wei, Zhen; Zhang, Qing; Wu, Xiangyu; Rong, Rong; Lu, Zhiliang; Su, Jionglong; de Magalhães, João Pedro; Rigden, Daniel J; Meng, Jia Journal: Nucleic acids research Issue: Volume 47:Issue 7(2019) Page Start: e41 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗