1. Basics of genome-scale metabolic modeling and applications on C1-utilization. Issue 20 (25th September 2018) Authors: Kabimoldayev, Ilyas; Nguyen, Anh Duc; Yang, Laurence; Park, Sunghoon; Lee, Eun Yeol; Kim, Donghyuk Journal: FEMS microbiology letters Issue: Volume 365:Issue 20(2018:Oct.) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. GripNet: Graph information propagation on supergraph for heterogeneous graphs. (January 2023) Authors: Xu, Hao; Sang, Shengqi; Bai, Peizhen; Li, Ruike; Yang, Laurence; Lu, Haiping Journal: Pattern recognition Issue: Volume 133(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance. Issue 1 (December 2018) Authors: Kavvas, Erol; Catoiu, Edward; Mih, Nathan; Yurkovich, James; Seif, Yara; Dillon, Nicholas; Heckmann, David; Anand, Amitesh; Yang, Laurence; Nizet, Victor; Monk, Jonathan; Palsson, Bernhard Journal: Nature communications Issue: Volume 9:Issue 1(2018) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Model-driven experimental design workflow expands understanding of regulatory role of Nac in Escherichia coli. Issue 1 (20th January 2023) Authors: Park, Joon Young; Lee, Sang-Mok; Ebrahim, Ali; Scott-Nevros, Zoe K; Kim, Jaehyung; Yang, Laurence; Sastry, Anand; Seo, Sang Woo; Palsson, Bernhard O; Kim, Donghyuk Journal: NAR genomics and bioinformatics Issue: Volume 5:Issue 1(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Modeling the multi-scale mechanisms of macromolecular resource allocation. (October 2018) Authors: Yang, Laurence; Yurkovich, James T; King, Zachary A; Palsson, Bernhard O Journal: Current opinion in microbiology Issue: Volume 45(2018) Page Start: 8 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. OxyR Is a Convergent Target for Mutations Acquired during Adaptation to Oxidative Stress-Prone Metabolic States. (25th October 2019) Authors: Anand, Amitesh; Chen, Ke; Catoiu, Edward; Sastry, Anand V; Olson, Connor A; Sandberg, Troy E; Seif, Yara; Xu, Sibei; Szubin, Richard; Yang, Laurence; Feist, Adam M; Palsson, Bernhard O Editors: Pond, Sergei Kosakovsky Journal: Molecular biology and evolution Issue: Volume 37:Number 3(2020) Page Start: 660 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Recent advances in genome-scale modeling of proteome allocation. Issue 26 (June 2021) Authors: Dahal, Sanjeev; Zhao, Jiao; Yang, Laurence Journal: Current opinion in systems biology Issue: Issue 26(2021) Page Start: 39 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. SolveME: fast and reliable solution of nonlinear ME models. Issue 1 (December 2016) Authors: Yang, Laurence; Ma, Ding; Ebrahim, Ali; Lloyd, Colton; Saunders, Michael; Palsson, Bernhard Journal: BMC bioinformatics Issue: Volume 17:Issue 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Synthesizing Systems Biology Knowledge from Omics Using Genome‐Scale Models. Issue 17 (12th July 2020) Authors: Dahal, Sanjeev; Yurkovich, James T.; Xu, Hao; Palsson, Bernhard O.; Yang, Laurence Journal: Proteomics Issue: Volume 20:Issue 17/18(2020) Page Start: n/a Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Systematic discovery of uncharacterized transcription factors in Escherichia coli K-12 MG1655. Issue 20 (23rd August 2018) Authors: Gao, Ye; Yurkovich, James T; Seo, Sang Woo; Kabimoldayev, Ilyas; Dräger, Andreas; Chen, Ke; Sastry, Anand V; Fang, Xin; Mih, Nathan; Yang, Laurence; Eichner, Johannes; Cho, Byung-Kwan; Kim, Donghyuk; Palsson, Bernhard O Journal: Nucleic acids research Issue: Volume 46:Issue 20(2018) Page Start: 10682 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗