1. A 20‐kb lineage‐specific genomic region tames virulence in pathogenic amphidiploid Verticillium longisporum. (5th May 2021) Authors: Harting, Rebekka; Starke, Jessica; Kusch, Harald; Pöggeler, Stefanie; Maurus, Isabel; Schlüter, Rabea; Landesfeind, Manuel; Bulla, Ingo; Nowrousian, Minou; de Jonge, Ronnie; Stahlhut, Gertrud; Hoff, Katharina J.; Aßhauer, Kathrin P.; Thürmer, Andrea; Stanke, Mario; Daniel, Rolf; Morgenstern, Burk... Journal: Molecular plant pathology Issue: Volume 22:Number 8(2021) Page Start: 939 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database. (6th January 2021) Authors: Brůna, Tomáš; Hoff, Katharina J; Lomsadze, Alexandre; Stanke, Mario; Borodovsky, Mark Journal: NAR genomics and bioinformatics Issue: Volume 3:issue 1(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Combining features in a graphical model to predict protein binding sites. Issue 5 (14th March 2015) Authors: Wierschin, Torsten; Wang, Keyu; Welter, Marlon; Waack, Stephan; Stanke, Mario Journal: Proteins Issue: Volume 83:Issue 5(2015) Page Start: 844 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Exome Sequencing Discloses Ionizing-radiation-induced DNA Variants in the Genome of Human Gingiva Fibroblasts. Issue 1 (July 2018) Authors: Nath, Neetika; Esche, Jennifer; Müller, Jessica; Jensen, Lars R.; Port, Matthias; Stanke, Mario; Kaderali, Lars; Scherthan, Harry; Kuss, Andreas W. Journal: Health physics Issue: Volume 115:Issue 1(2018:Jul.) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. LearnMSA: learning and aligning large protein families. (18th November 2022) Authors: Becker, Felix; Stanke, Mario Journal: GigaScience Issue: Volume 11(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges. Issue 9 (19th June 2017) Authors: Cai, Binghuang; Li, Biao; Kiga, Nikki; Thusberg, Janita; Bergquist, Timothy; Chen, Yun‐Ching; Niknafs, Noushin; Carter, Hannah; Tokheim, Collin; Beleva‐Guthrie, Violeta; Douville, Christopher; Bhattacharya, Rohit; Yeo, Hui Ting Grace; Fan, Jean; Sengupta, Sohini; Kim, Dewey; Cline, Melissa; Turne... Journal: Human mutation Issue: Volume 38:Issue 9(2017) Page Start: 1266 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Predicting Genes in Single Genomes with AUGUSTUS. Issue 1 (22nd November 2018) Authors: Hoff, Katharina J.; Stanke, Mario Editors: Baxevanis, Andreas D.; Petsko, Gregory A.; Stein, Lincoln D.; Stormo, Gary D. Journal: Current protocols in bioinformatics Issue: Volume 65:Issue 1(2019) Page Start: n/a Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci. (November 2018) Authors: Lilue, Jingtao; Doran, Anthony; Fiddes, Ian; Abrudan, Monica; Armstrong, Joel; Bennett, Ruth; Chow, William; Collins, Joanna; Collins, Stephan; Czechanski, Anne; Danecek, Petr; Diekhans, Mark; Dolle, Dirk-Dominik; Dunn, Matt; Durbin, Richard; Earl, Dent; Ferguson-Smith, Anne; Flicek, Paul; Flint,... Journal: Nature genetics Issue: Volume 50:Number 11(2018) Page Start: 1574 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Verticillium transcription activator of adhesion Vta2 suppresses microsclerotia formation and is required for systemic infection of plant roots. Issue 2 (17th January 2014) Authors: Tran, Van‐Tuan; Braus‐Stromeyer, Susanna A.; Kusch, Harald; Reusche, Michael; Kaever, Alexander; Kühn, Anika; Valerius, Oliver; Landesfeind, Manuel; Aßhauer, Kathrin; Tech, Maike; Hoff, Katharina; Pena‐Centeno, Tonatiuh; Stanke, Mario; Lipka, Volker; Braus, Gerhard H. Journal: New phytologist Issue: Volume 202:Issue 2(2014) Page Start: 565 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Verticillium transcription activator of adhesion Vta2 suppresses microsclerotia formation and is required for systemic infection of plant roots. Issue 2 (17th January 2014) Authors: Tran, Van‐Tuan; Braus‐Stromeyer, Susanna A.; Kusch, Harald; Reusche, Michael; Kaever, Alexander; Kühn, Anika; Valerius, Oliver; Landesfeind, Manuel; Aßhauer, Kathrin; Tech, Maike; Hoff, Katharina; Pena‐Centeno, Tonatiuh; Stanke, Mario; Lipka, Volker; Braus, Gerhard H. Journal: New phytologist Issue: Volume 202:Issue 2(2014) Page Start: 565 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗