1. An expanded evaluation of protein function prediction methods shows an improvement in accuracy. Issue 1 (December 2016) Authors: Jiang, Yuxiang; Oron, Tal Ronnen; Clark, Wyatt T.; Bankapur, Asma R.; D'Andrea, Daniel; Lepore, Rosalba; Funk, Christopher S.; Kahanda, Indika; Verspoor, Karin M.; Ben-Hur, Asa; Koo, Da Chen Emily; Penfold-Brown, Duncan; Shasha, Dennis; Youngs, Noah; Bonneau, Richard; Lin, Alexandra; Sahraeian, S... Journal: Genome biology Issue: Volume 17:Issue 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. An HMM approach expands the landscape of sesquiterpene cyclases across the kingdom Fungi. Issue 4 (19th April 2023) Authors: Hage, Hayat; Couillaud, Julie; Salamov, Asaf; Loussouarn-Yvon, Margot; Durbesson, Fabien; Ormeño, Elena; Grisel, Sacha; Duquesne, Katia; Vincentelli, Renaud; Grigoriev, Igor; Iacazio, Gilles; Rosso, Marie-Noëlle Journal: Microbial genomics Issue: Volume 9:Issue 4(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Issue 1 (December 2017) Authors: de Vries, Ronald; Riley, Robert; Wiebenga, Ad; Aguilar-Osorio, Guillermo; Amillis, Sotiris; Uchima, Cristiane; Anderluh, Gregor; Asadollahi, Mojtaba; Askin, Marion; Barry, Kerrie; Battaglia, Evy; Bayram, Özgür; Benocci, Tiziano; Braus-Stromeyer, Susanna; Caldana, Camila; Cánovas, David; Cerqueira... Journal: Genome biology Issue: Volume 18:Issue 1(2017) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Divergent Evolution of Early Terrestrial Fungi Reveals the Evolution of Mucormycosis Pathogenicity Factors. (17th March 2023) Authors: Wang, Yan; Chang, Ying; Ortañez, Jericho; Peña, Jesús F; Carter-House, Derreck; Reynolds, Nicole K; Smith, Matthew E; Benny, Gerald; Mondo, Stephen J; Salamov, Asaf; Lipzen, Anna; Pangilinan, Jasmyn; Guo, Jie; LaButti, Kurt; Andreopolous, William; Tritt, Andrew; Keymanesh, Keykhosrow; Yan, Mi; Ba... Editors: Ma, Li-Jun Journal: Genome biology and evolution Issue: Volume 15:Number 4(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri. (December 2018) Authors: Vesth, Tammi; Nybo, Jane; Theobald, Sebastian; Frisvad, Jens; Larsen, Thomas; Nielsen, Kristian; Hoof, Jakob; Brandl, Julian; Salamov, Asaf; Riley, Robert; Gladden, John; Phatale, Pallavi; Nielsen, Morten; Lyhne, Ellen; Kogle, Martin; Strasser, Kimchi; McDonnell, Erin; Barry, Kerrie; Clum, Alicia... Journal: Nature genetics Issue: Volume 50:Number 12(2018) Page Start: 1688 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution. (21st January 2022) Authors: Wint, Rhondene; Salamov, Asaf; Grigoriev, Igor V Editors: Townsend, Jeffrey Journal: Molecular biology and evolution Issue: Volume 39:Number 2(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Leveraging single-cell genomics to expand the fungal tree of life. (December 2018) Authors: Ahrendt, Steven; Quandt, C.; Ciobanu, Doina; Clum, Alicia; Salamov, Asaf; Andreopoulos, Bill; Cheng, Jan-Fang; Woyke, Tanja; Pelin, Adrian; Henrissat, Bernard; Reynolds, Nicole; Benny, Gerald; Smith, Matthew; James, Timothy; Grigoriev, Igor Journal: Nature microbiology Issue: Volume 3:Number 12(2018) Page Start: 1417 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. PhycoCosm, a comparative algal genomics resource. Issue Volume 49:Issue D1(2021) (26th October 2020) Authors: Grigoriev, Igor V; Hayes, Richard D; Calhoun, Sara; Kamel, Bishoy; Wang, Alice; Ahrendt, Steven; Dusheyko, Sergey; Nikitin, Roman; Mondo, Stephen J; Salamov, Asaf; Shabalov, Igor; Kuo, Alan Journal: Nucleic acids research Issue: Volume 49:Issue D1(2021) Page Start: D1004 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus. Issue 9 (1st September 2020) Authors: Tabima, Javier F; Trautman, Ian A; Chang, Ying; Wang, Yan; Mondo, Stephen; Kuo, Alan; Salamov, Asaf; Grigoriev, Igor V; Stajich, Jason E; Spatafora, Joseph W Journal: G3 Issue: Volume 10:Issue 9(2020) Page Start: 3417 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. The Pedant Human Genome Database ? Functional Annotation of the Human Genome. (2002) Authors: Schüller, Christine M.E.; Geier, Birgitta; Fritz, Andreas; Salamov, Asaf; Seledsov, Igor; Solovyev, Victor; Frishman, Dimitrij Journal: TheScientificWorldjournal Issue: Volume 2(2002) Page Start: 82 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗