11. Identification of drug-specific pathways based on gene expression data: application to drug induced lung injury1. Issue 8 (3rd August 2015) Authors: Melas, Ioannis N.; Sakellaropoulos, Theodore; Iorio, Francesco; Alexopoulos, Leonidas G.; Loh, Wei-Yin; Lauffenburger, Douglas A.; Saez-Rodriguez, Julio; Bai, Jane P. F. Journal: Integrative biology Issue: Volume 7:Issue 8(2015:Aug.) Page Start: 904 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
12. Integrative approaches for signalling and metabolic networks. Issue 8 (3rd August 2015) Authors: Hatzimanikatis, Vassily; Saez-Rodriguez, Julio Journal: Integrative biology Issue: Volume 7:Issue 8(2015:Aug.) Page Start: 844 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
13. Literature and data-driven based inference of signalling interactions using time-course data. Issue 26 (2019) Authors: Gjerga, Enio; Trairatphisan, Panuwat; Gabor, Attila; Saez-Rodriguez, Julio Journal: IFAC-PapersOnLine Issue: Volume 52:Issue 26(2019) Page Start: 52 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
14. Looking beyond the cancer cell for effective drug combinations. Issue 1 (December 2016) Authors: Dry, Jonathan; Yang, Mi; Saez-Rodriguez, Julio Journal: Genome medicine Issue: Volume 8:Issue 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
15. Mechanism-based biomarker discovery. Issue 8 (August 2017) Authors: Antoranz, Asier; Sakellaropoulos, Theodore; Saez-Rodriguez, Julio; Alexopoulos, Leonidas G. Journal: Drug discovery today Issue: Volume 22:Issue 8(2017) Page Start: 1209 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
16. Parallel ant colony optimization for the training of cell signaling networks. (1st December 2022) Authors: González, Patricia; Prado-Rodriguez, Roberto; Gábor, Attila; Saez-Rodriguez, Julio; Banga, Julio R.; Doallo, Ramón Journal: Expert systems with applications Issue: Volume 208(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
17. Reusability and composability in process description maps: RAS–RAF–MEK–ERK signalling. Issue 5 (8th April 2021) Authors: Mazein, Alexander; Rougny, Adrien; Karr, Jonathan R; Saez-Rodriguez, Julio; Ostaszewski, Marek; Schneider, Reinhard Journal: Briefings in bioinformatics Issue: Volume 22:Issue 5(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
18. Setting the basis of best practices and standards for curation and annotation of logical models in biology—highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop. Issue 2 (21st April 2020) Authors: Niarakis, Anna; Kuiper, Martin; Ostaszewski, Marek; Malik Sheriff, Rahuman S; Casals-Casas, Cristina; Thieffry, Denis; Freeman, Tom C; Thomas, Paul; Touré, Vasundra; Noël, Vincent; Stoll, Gautier; Saez-Rodriguez, Julio; Naldi, Aurélien; Oshurko, Eugenia; Xenarios, Ioannis; Soliman, Sylvain; Chaou... Journal: Briefings in bioinformatics Issue: Volume 22:Issue 2(2021) Page Start: 1848 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
19. Signaling networks in MS: A systems-based approach to developing new pharmacological therapies. (February 2015) Authors: Kotelnikova, Ekaterina; Bernardo-Faura, Marti; Silberberg, Gilad; Kiani, Narsis A; Messinis, Dimitris; Melas, Ioannis N; Artigas, Laura; Schwartz, Elena; Mazo, Ilya; Masso, Mar; Alexopoulos, Leonidas G; Mas, Jose Manuel; Olsson, Tomas; Tegner, Jesper; Martin, Roland; Zamora, Albert; Paul, Friedem... Journal: Multiple sclerosis Issue: Volume 21:Number 2(2015) Page Start: 138 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
20. Signatures of cell death and proliferation in perturbation transcriptomics data—from confounding factor to effective prediction. Issue 19 (25th September 2019) Authors: Szalai, Bence; Subramanian, Vigneshwari; Holland, Christian H; Alföldi, Róbert; Puskás, László G; Saez-Rodriguez, Julio Journal: Nucleic acids research Issue: Volume 47:Issue 19(2019) Page Start: 10010 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗