1. Changes in symptomatology, reinfection, and transmissibility associated with the SARS-CoV-2 variant B.1.1.7: an ecological study. (May 2021) Authors: Graham, Mark S; Sudre, Carole H; May, Anna; Antonelli, Michela; Murray, Benjamin; Varsavsky, Thomas; Kläser, Kerstin; Canas, Liane S; Molteni, Erika; Modat, Marc; Drew, David A; Nguyen, Long H; Polidori, Lorenzo; Selvachandran, Somesh; Hu, Christina; Capdevila, Joan; Hammers, Alexander; Chan, And... Journal: Lancet Issue: Volume 6:Number 5(2021) Page Start: e335 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Deep sequencing of HIV-1 reveals extensive subtype variation and drug resistance after failure of first-line antiretroviral regimens in Nigeria. (6th November 2021) Authors: El Bouzidi, Kate; Datir, Rawlings P.; Kwaghe, Vivian; Roy, Sunando; Frampton, Dan; Breuer, Judith; Ogbanufe, Obinna; Murtala-Ibrahim, Fati; Charurat, Man; Dakum, Patrick; Sabin, Caroline A.; Ndembi, Nicaise; Gupta, Ravindra K. Journal: Journal of antimicrobial chemotherapy Issue: Volume 77:Number 2(2022) Page Start: 474 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Evolution of viral variants in remdesivir‐treated and untreated SARS‐CoV‐2‐infected pediatrics patients. Issue 1 (4th September 2021) Authors: Boshier, Florencia A. T.; Pang, Juanita; Penner, Justin; Parker, Matthew; Alders, Nele; Bamford, Alasdair; Grandjean, Louis; Grunewald, Stephanie; Hatcher, James; Best, Timothy; Dalton, Caroline; Bynoe, Patricia Dyal; Frauenfelder, Claire; Köeglmeier, Jutta; Myerson, Phoebe; Roy, Sunando; William... Other Names: Luo Guangxiang (George) guestEditor.; Ly Hinh guestEditor.; Gao Shou‐Jiang guestEditor. Journal: Journal of medical virology Issue: Volume 94:Issue 1(2022) Page Start: 161 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Haplotype assignment of longitudinal viral deep sequencing data using covariation of variant frequencies. Issue 2 (6th October 2022) Authors: Venturini, Cristina; Pang, Juanita; Tamuri, Asif U; Roy, Sunando; Atkinson, Claire; Griffiths, Paul; Breuer, Judith; Goldstein, Richard A Journal: Virus evolution Issue: Volume 8:Issue 2(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. High prevalence of integrase mutation L74I in West African HIV-1 subtypes prior to integrase inhibitor treatment. (27th February 2020) Authors: El Bouzidi, Kate; Kemp, Steven A; Datir, Rawlings P; Murtala-Ibrahim, Fati; Aliyu, Ahmad; Kwaghe, Vivian; Frampton, Dan; Roy, Sunando; Breuer, Judith; Sabin, Caroline A; Ogbanufe, Obinna; Charurat, Man E; Bonsall, David; Golubchik, Tanya; Fraser, Christophe; Dakum, Patrick; Ndembi, Nicaise; Gupta... Journal: Journal of antimicrobial chemotherapy Issue: Volume 75:Number 6(2020) Page Start: 1575 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study. Issue 1 (January 2022) Authors: Twohig, Katherine A; Nyberg, Tommy; Zaidi, Asad; Thelwall, Simon; Sinnathamby, Mary A; Aliabadi, Shirin; Seaman, Shaun R; Harris, Ross J; Hope, Russell; Lopez-Bernal, Jamie; Gallagher, Eileen; Charlett, Andre; De Angelis, Daniela; Presanis, Anne M; Dabrera, Gavin; Koshy, Cherian; Ash, Amy; Wise, ... Journal: Lancet infectious diseases Issue: Volume 22:Issue 1(2022) Page Start: 35 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Post-Vaccination Coronavirus Disease 2019: A Case-Control Study and Genomic Analysis of 119 Breakthrough Infections in Partially Vaccinated Individuals . (19th August 2021) Authors: Baltas, Ioannis; Boshier, Florencia A T; Williams, Charlotte A; Bayzid, Nadua; Cotic, Marius; Afonso Guerra-Assunção, José; Irish-Tavares, Dianne; Haque, Tanzina; Hart, Jennifer; Roy, Sunando; Williams, Rachel; Breuer, Judith; Mahungu, Tabitha W Journal: Clinical infectious diseases Issue: Volume 75:Number 2(2022) Page Start: 305 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. The Alpha variant was not associated with excess nosocomial SARS-CoV-2 infection in a multi-centre UK hospital study. Issue 6 (December 2021) Authors: Boshier, Florencia A.T.; Venturini, Cristina; Stirrup, Oliver; Guerra-Assunção, José Afonso; Alcolea-Medina, Adela; Becket, Angela H.; Byott, Matthew; Charalampous, Themoula; Filipe, Ana da Silva; Frampton, Dan; Glaysher, Sharon; Khan, Tabassum; Kulasegara-Shylini, Raghavendran; Kele, Beatrix; Mo... Journal: Journal of infection Issue: Volume 83:Issue 6(2021) Page Start: 693 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Use of Whole-Genome Sequencing of Adenovirus in Immunocompromised Pediatric Patients to Identify Nosocomial Transmission and Mixed-Genotype Infection. (4th June 2018) Authors: Houldcroft, Charlotte J; Roy, Sunando; Morfopoulou, Sofia; Margetts, Ben K; Depledge, Daniel P; Cudini, Juliana; Shah, Divya; Brown, Julianne R; Romero, Erika Yara; Williams, Rachel; Cloutman-Green, Elaine; Rao, Kanchan; Standing, Joseph F; Hartley, John C; Breuer, Judith Journal: Journal of infectious diseases Issue: Volume 218:Number 8(2018) Page Start: 1261 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Whole-genome Sequencing Provides Data for Stratifying Infection Prevention and Control Management of Nosocomial Influenza A. (17th April 2019) Authors: Roy, Sunando; Hartley, John; Dunn, Helen; Williams, Rachel; Williams, Charlotte A; Breuer, Judith Journal: Clinical infectious diseases Issue: Volume 69:Number 10(2019) Page Start: 1649 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗