1. 1202. Multimodal Sequencing of a Clonal Case Cluster of Carbapenem-Resistant Citrobacter Reveals Unexpectedly Rapid Dynamics of KPC3-Containing Plasmids. (26th November 2018) Authors: Bhattacharyya, Roby; Pironti, Alejandro; Walker, Bruce J; Manson, Abigail; Pierce, Virginia; Ferraro, Mary Jane; Shenoy, Erica; Hooper, David C; Earl, Ashlee Journal: Open forum infectious diseases Issue: Volume 5(2018)Supplement 1 Page Start: S364 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Determination of Phenotypic Resistance Cutoffs From Routine Clinical Data. (15th April 2017) Authors: Pironti, Alejandro; Walter, Hauke; Pfeifer, Nico; Knops, Elena; Lübke, Nadine; Büch, Joachim; Di Giambenedetto, Simona; Kaiser, Rolf; Lengauer, Thomas Journal: Journal of acquired immune deficiency syndromes Issue: Volume 74:Number 5(2017) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Geno2pheno[ngs-freq]: a genotypic interpretation system for identifying viral drug resistance using next-generation sequencing data. Issue Volume 46:Issue W1(2018) (1st May 2018) Authors: Döring, Matthias; Büch, Joachim; Friedrich, Georg; Pironti, Alejandro; Kalaghatgi, Prabhav; Knops, Elena; Heger, Eva; Obermeier, Martin; Däumer, Martin; Thielen, Alexander; Kaiser, Rolf; Lengauer, Thomas; Pfeifer, Nico Journal: Nucleic acids research Issue: Volume 46:Issue W1(2018) Page Start: W271 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Pathogen Species Is Associated With Mortality in Nosocomial Bloodstream Infection in Patients With COVID-19. (5th April 2022) Authors: Gago, Juan; Filardo, Thomas D; Conderino, Sarah; Magaziner, Samuel J; Dubrovskaya, Yanina; Inglima, Kenneth; Iturrate, Eduardo; Pironti, Alejandro; Schluter, Jonas; Cadwell, Ken; Hochman, Sarah; Li, Huilin; Torres, Victor J; Thorpe, Lorna E; Shopsin, Bo Journal: Open forum infectious diseases Issue: Volume 9:Number 6(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. SynerClust: a highly scalable, synteny-aware orthologue clustering tool. Issue 11 (12th November 2018) Authors: Georgescu, Christophe H.; Manson, Abigail L.; Griggs, Alexander D.; Desjardins, Christopher A.; Pironti, Alejandro; Wapinski, Ilan; Abeel, Thomas; Haas, Brian J.; Earl, Ashlee M. Journal: Microbial genomics Issue: Volume 4:Issue 11(2018) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗