1. A hyperdynamic H3.3 nucleosome marks promoter regions in pluripotent embryonic stem cells. Issue 21 (25th September 2017) Authors: Schlesinger, Sharon; Kaffe, Binyamin; Melcer, Shai; Aguilera, Jose D.; Sivaraman, Divya M.; Kaplan, Tommy; Meshorer, Eran Journal: Nucleic acids research Issue: Volume 45:Issue 21(2017) Page Start: 12181 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Comparative analysis of T4 DNA ligases and DNA polymerases used in chromosome conformation capture assays. (April 2015) Authors: Schwartz, Michal; Sarusi, Avital; Deitch, Rachel T.; Tal, Moran; Raz, Dana; Sung, Myong-Hee; Kaplan, Tommy; Hakim, Ofir Journal: Biotechniques Issue: Volume 58:Number 4(2015) Page Start: 195 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Comprehensive human cell-type methylation atlas reveals origins of circulating cell-free DNA in health and disease. Issue 1 (December 2018) Authors: Moss, Joshua; Magenheim, Judith; Neiman, Daniel; Zemmour, Hai; Loyfer, Netanel; Korach, Amit; Samet, Yaacov; Maoz, Myriam; Druid, Henrik; Arner, Peter; Fu, Keng-Yeh; Kiss, Endre; Spalding, Kirsty; Landesberg, Giora; Zick, Aviad; Grinshpun, Albert; Shapiro, A.; Grompe, Markus; Wittenberg, Avigail;... Journal: Nature communications Issue: Volume 9:Issue 1(2018) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Ep300 sequestration to functionally distinct glucocorticoid receptor binding loci underlie rapid gene activation and repression. Issue 12 (17th June 2022) Authors: Portuguez, Avital Sarusi; Grbesa, Ivana; Tal, Moran; Deitch, Rachel; Raz, Dana; Kliker, Limor; Weismann, Ran; Schwartz, Michal; Loza, Olga; Cohen, Leslie; Marchenkov-Flam, Libi; Sung, Myong-Hee; Kaplan, Tommy; Hakim, Ofir Journal: Nucleic acids research Issue: Volume 50:Issue 12(2022) Page Start: 6702 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Functional characterization of the ZEB2 regulatory landscape. (26th December 2018) Authors: Bar Yaacov, Reut; Eshel, Reut; Farhi, Einan; Shemuluvich, Fania; Kaplan, Tommy; Birnbaum, Ramon Y Journal: Human molecular genetics Issue: Volume 28:Number 9(2019) Page Start: 1487 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Hierarchical role for transcription factors and chromatin structure in genome organization along adipogenesis. (16th August 2017) Authors: Sarusi Portuguez, Avital; Schwartz, Michal; Siersbaek, Rasmus; Nielsen, Ronni; Sung, Myong‐Hee; Mandrup, Susanne; Kaplan, Tommy; Hakim, Ofir Journal: FEBS journal Issue: Volume 284:Number 19(2017) Page Start: 3230 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical topological domains. Issue 1 (December 2017) Authors: Ron, Gil; Globerson, Yuval; Moran, Dror; Kaplan, Tommy Journal: Nature communications Issue: Volume 8:Issue 1(2017) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Reconstructing spatial organizations of chromosomes through manifold learning. Issue 8 (2nd February 2018) Authors: Zhu, Guangxiang; Deng, Wenxuan; Hu, Hailin; Ma, Rui; Zhang, Sai; Yang, Jinglin; Peng, Jian; Kaplan, Tommy; Zeng, Jianyang Journal: Nucleic acids research Issue: Volume 46:Issue 8(2018) Page Start: e50 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Stable Binding of the Conserved Transcription Factor Grainy Head to its Target Genes Throughout Drosophila melanogaster Development. Issue 2 (1st February 2017) Authors: Nevil, Markus; Bondra, Eliana R; Schulz, Katharine N; Kaplan, Tommy; Harrison, Melissa M Journal: Genetics Issue: Volume 205:Issue 2(2017) Page Start: 605 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Universal lung epithelium DNA methylation markers for detection of lung damage in liquid biopsies. Issue 5 (3rd November 2022) Authors: Magenheim, Judith; Rokach, Ariel; Peretz, Ayelet; Loyfer, Netanel; Cann, Gordon; Amini, Hamed; Moradi, Patriss; Nagaraju, Sudharani; Sameer, Wafa; Cohen, Assaf; Fogel, Ophir; Kuint, Rottem; Abutbul, Avraham; Abu Rmeileh, Aiman; Karameh, Mutaz; Cohen Goichman, Polina; Wald, Ori; Korach, Amit; Neim... Journal: European respiratory journal Issue: Volume 60:Issue 5(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗