1. 1271. HIV-1 Drug Resistance in Patients Failing Integrase Strand Transfer Inhibitor-Based Regimens in Rhode Island, USA. (15th December 2022) Authors: Nagel, Katherine E; Novitsky, Vladimir; Aung, Su; Solomon, Matthew; Won, Cindy; Brotherton, Amy; Howison, Mark; Gillani, Fizza S; Kantor, Rami Journal: Open forum infectious diseases Issue: Volume 9:(2022)Supplement 2 Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. 1896. Statewide Genomic Surveillance of SARS-CoV-2 Variants in Rhode Island. (15th December 2022) Authors: Singh, Manjot; Novitsky, Vladimir; Howison, Mark; Carpenter-Azevedo, Kristin; Huard, Richard; King, Ewa; Kantor, Rami Journal: Open forum infectious diseases Issue: Volume 9:(2022)Supplement 2 Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. An Integrated Perspective on Phylogenetic Workflows. (February 2016) Authors: Guang, August; Zapata, Felipe; Howison, Mark; Lawrence, Charles E.; Dunn, Casey W. Journal: Trends in ecology & evolution Issue: Volume 31:Number 2(2016) Page Start: 116 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Beyond HIV outbreaks: protocol, rationale and implementation of a prospective study quantifying the benefit of incorporating viral sequence clustering analysis into routine public health interventions. Issue 4 (21st April 2022) Authors: Steingrimsson, Jon A; Fulton, John; Howison, Mark; Novitsky, Vlad; Gillani, Fizza S; Bertrand, Thomas; Civitarese, Anna; Howe, Katharine; Ronquillo, Guillermo; Lafazia, Benjamin; Parillo, Zoanne; Marak, Theodore; Chan, Philip A; Bhattarai, Lila; Dunn, Casey; Bandy, Utpala; Scott, Nicole Alexander... Journal: BMJ open Issue: Volume 12:Issue 4(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Bioinformatic data processing pipelines in support of next‐generation sequencing‐based HIV drug resistance testing: the Winnipeg Consensus. Issue 10 (22nd October 2018) Authors: Ji, Hezhao; Enns, Eric; Brumme, Chanson J.; Parkin, Neil; Howison, Mark; Lee, Emma R.; Capina, Rupert; Marinier, Eric; Avila‐Rios, Santiago; Sandstrom, Paul; Van Domselaar, Gary; Harrigan, Richard; Paredes, Roger; Kantor, Rami; Noguera‐Julian, Marc Journal: Journal of the International AIDS Society Issue: Volume 21:Issue 10(2018) Page Start: n/a Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Evolution of Gene Expression across Species and Specialized Zooids in Siphonophora. (3rd February 2022) Authors: Munro, Catriona; Zapata, Felipe; Howison, Mark; Siebert, Stefan; Dunn, Casey W Editors: Rogers, Rebekah Journal: Molecular biology and evolution Issue: Volume 39:Number 2(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Longitudinal typing of molecular HIV clusters in a statewide epidemic. (1st September 2021) Authors: Novitsky, Vlad; Steingrimsson, Jon; Howison, Mark; Dunn, Casey; Gillani, Fizza S.; Manne, Akarsh; Li, Yuanning; Spence, Matthew; Parillo, Zoanne; Fulton, John; Marak, Theodore; Chan, Philip; Bertrand, Thomas; Bandy, Utpala; Alexander-Scott, Nicole; Hogan, Joseph; Kantor, Rami Journal: AIDS Issue: Volume 35:Number 11(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Not all clusters are equal: dynamics of molecular HIV-1 clusters in a statewide Rhode Island epidemic. (1st March 2023) Authors: Novitsky, Vlad; Steingrimsson, Jon; Howison, Mark; Dunn, Casey W.; Gillani, Fizza S.; Fulton, John; Bertrand, Thomas; Howe, Katharine; Bhattarai, Lila; Ronquillo, Guillermo; MacAskill, Meghan; Bandy, Utpala; Hogan, Joseph; Kantor, Rami Journal: AIDS Issue: Volume 37:Number 3(2023) Page Start: 389 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Statewide Longitudinal Trends in Transmitted HIV-1 Drug Resistance in Rhode Island, USA. (7th December 2021) Authors: Novitsky, Vlad; Steingrimsson, Jon; Gillani, Fizza S; Howison, Mark; Aung, Su; Solomon, Matthew; Won, Cindy Y; Brotherton, Amy; Shah, Rajeev; Dunn, Casey; Fulton, John; Bertrand, Thomas; Civitarese, Anna; Howe, Katharine; Marak, Theodore; Chan, Philip; Bandy, Utpala; Alexander-Scott, Nicole; Hoga... Journal: Open forum infectious diseases Issue: Volume 9:Number 1(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗