1. Accuracy or novelty: what can we gain from target-specific machine-learning-based scoring functions in virtual screening?. Issue 5 (8th January 2021) Authors: Shen, Chao; Weng, Gaoqi; Zhang, Xujun; Leung, Elaine Lai-Han; Yao, Xiaojun; Pang, Jinping; Chai, Xin; Li, Dan; Wang, Ercheng; Cao, Dongsheng; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 22:Issue 5(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Beware of the generic machine learning-based scoring functions in structure-based virtual screening. Issue 3 (2nd June 2020) Authors: Shen, Chao; Hu, Ye; Wang, Zhe; Zhang, Xujun; Pang, Jinping; Wang, Gaoang; Zhong, Haiyang; Xu, Lei; Cao, Dongsheng; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 22:Issue 3(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Can machine learning consistently improve the scoring power of classical scoring functions? Insights into the role of machine learning in scoring functions. Issue 1 (25th January 2020) Authors: Shen, Chao; Hu, Ye; Wang, Zhe; Zhang, Xujun; Zhong, Haiyang; Wang, Gaoang; Yao, Xiaojun; Xu, Lei; Cao, Dongsheng; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 22:Issue 1(2021) Page Start: 497 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Characterizing the stabilization effects of stabilizers in protein–protein systems with end-point binding free energy calculations. Issue 3 (9th April 2022) Authors: Tang, Rongfan; Chen, Pengcheng; Wang, Zhe; Wang, Lingling; Hao, Haiping; Hou, Tingjun; Sun, Huiyong Journal: Briefings in bioinformatics Issue: Volume 23:Issue 3(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Comprehensive assessment of deep generative architectures for de novo drug design. Issue 1 (21st December 2021) Authors: Wang, Mingyang; Sun, Huiyong; Wang, Jike; Pang, Jinping; Chai, Xin; Xu, Lei; Li, Honglin; Cao, Dongsheng; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 23:Issue 1(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Comprehensive assessment of nine docking programs on type II kinase inhibitors: prediction accuracy of sampling power, scoring power and screening power. (31st October 2018) Authors: Shen, Chao; Wang, Zhe; Yao, Xiaojun; Li, Youyong; Lei, Tailong; Wang, Ercheng; Xu, Lei; Zhu, Feng; Li, Dan; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 21:Number 1(2020) Page Start: 282 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Cooperation of structural motifs controls drug selectivity in cyclin-dependent kinases: an advanced theoretical analysis. Issue 1 (29th December 2022) Authors: Wang, Lingling; Xu, Lei; Wang, Zhe; Hou, Tingjun; Hao, Haiping; Sun, Huiyong Journal: Briefings in bioinformatics Issue: Volume 24:Issue 1(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. DeepAtomicCharge: a new graph convolutional network-based architecture for accurate prediction of atomic charges. Issue 3 (25th August 2020) Authors: Wang, Jike; Cao, Dongsheng; Tang, Cunchen; Xu, Lei; He, Qiaojun; Yang, Bo; Chen, Xi; Sun, Huiyong; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 22:Issue 3(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Do we need different machine learning algorithms for QSAR modeling? A comprehensive assessment of 16 machine learning algorithms on 14 QSAR data sets. Issue 4 (14th December 2020) Authors: Wu, Zhenxing; Zhu, Minfeng; Kang, Yu; Leung, Elaine Lai-Han; Lei, Tailong; Shen, Chao; Jiang, Dejun; Wang, Zhe; Cao, Dongsheng; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 22:Issue 4(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. FastDRH: a webserver to predict and analyze protein–ligand complexes based on molecular docking and MM/PB(GB)SA computation. Issue 5 (18th May 2022) Authors: Wang, Zhe; Pan, Hong; Sun, Huiyong; Kang, Yu; Liu, Huanxiang; Cao, Dongsheng; Hou, Tingjun Journal: Briefings in bioinformatics Issue: Volume 23:Issue 5(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗