1. Ancestral gene synteny reconstruction improves extant species scaffolding. (December 2015) Authors: Anselmetti, Yoann; Berry, Vincent; Chauve, Cedric; Chateau, Annie; Tannier, Eric; Bérard, Sèverine Journal: BMC genomics Issue: Volume 16:Number 10(2015) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Automated identification of maximal differential cell populations in flow cytometry data. Issue 2 (22nd October 2021) Authors: Yue, Alice; Chauve, Cedric; Libbrecht, Maxwell W.; Brinkman, Ryan R. Journal: Cytometry Issue: Volume 101:Issue 2(2022) Page Start: 177 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes. Issue 9 (8th July 2017) Authors: Luhmann, Nina; Doerr, Daniel; Chauve, Cedric Journal: Microbial genomics Issue: Volume 3:Issue 9(2017) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled Phylogenies. (1st May 2017) Authors: Duchemin, Wandrille; Anselmetti, Yoann; Patterson, Murray; Ponty, Yann; B�rard, S�verine; Chauve, Cedric; Scornavacca, Celine; Daubin, Vincent; Tannier, Eric Journal: Genome biology and evolution Issue: Volume 9:Number 5(2017:May) Page Start: 1312 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Evolution of genes neighborhood within reconciled phylogenies: an ensemble approach. Issue 19 (December 2015) Authors: Chauve, Cedric; Ponty, Yann; Zanetti, João Journal: BMC bioinformatics Issue: Volume 16:Issue 19(2015) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing. Issue 2 (8th December 2022) Authors: Orabi, Baraa; Xie, Ning; McConeghy, Brian; Dong, Xuesen; Chauve, Cedric; Hach, Faraz Journal: Nucleic acids research Issue: Volume 51:Issue 2(2023) Page Start: e11 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. MentaLiST – A fast MLST caller for large MLST schemes. Issue 2 (10th January 2018) Authors: Feijao, Pedro; Yao, Hua-Ting; Fornika, Dan; Gardy, Jennifer; Hsiao, William; Chauve, Cedric; Chindelevitch, Leonid Journal: Microbial genomics Issue: Volume 4:Issue 2(2018) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗