1. A Phylogenetic Framework to Simulate Synthetic Interspecies RNA-Seq Data. (12th December 2022) Authors: Bastide, Paul; Soneson, Charlotte; Stern, David B; Lespinet, Olivier; Gallopin, Mélina Editors: Battistuzzi, Fabia Ursula Journal: Molecular biology and evolution Issue: Volume 40:Number 1(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Detection of adaptive shifts on phylogenies by using shifted stochastic processes on a tree. (30th September 2016) Authors: Bastide, Paul; Mariadassou, Mahendra; Robin, Stéphane Journal: Journal of the Royal Statistical Society Issue: Volume 79:Number 4(2017) Page Start: 1067 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Inference of Adaptive Shifts for Multivariate Correlated Traits. (27th January 2018) Authors: Bastide, Paul; Ané, Cécile; Robin, Stéphane; Mariadassou, Mahendra Editors: Alfaro, Michael Journal: Systematic biology Issue: Volume 67:Number 4(2018:Aug.) Page Start: 662 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Markov-Modulated Continuous-Time Markov Chains to Identify Site- and Branch-Specific Evolutionary Variation in BEAST. (16th May 2020) Authors: Baele, Guy; Gill, Mandev S; Bastide, Paul; Lemey, Philippe; Suchard, Marc A Editors: Posada, David Journal: Systematic biology Issue: Volume 70:Number 1(2021) Page Start: 181 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Multiple factors behind early diversification of skull morphology in the continental radiation of New World monkeys*. (9th October 2018) Authors: Aristide, Leandro; Bastide, Paul; dos Reis, Sergio Furtado; Pires dos Santos, Thaís M.; Lopes, Ricardo T.; Perez, S. Ivan Journal: Evolution Issue: Volume 72:Number 12(2018) Page Start: 2697 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Multiple factors behind early diversification of skull morphology in the continental radiation of New World monkeys. (1st December 2018) Authors: Aristide, Leandro; Bastide, Paul; dos Reis, Sergio Furtado; Pires dos Santos, Thaís M.; Lopes, Ricardo T.; Perez, S. Ivan Journal: Evolution Issue: Volume 72:Number 12(2018) Page Start: 2697 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Nosoi: A stochastic agent‐based transmission chain simulation framework in r. Issue 8 (21st June 2020) Authors: Lequime, Sebastian; Bastide, Paul; Dellicour, Simon; Lemey, Philippe; Baele, Guy Editors: Johnson, Louise Journal: Methods in ecology and evolution Issue: Volume 11:Issue 8(2020) Page Start: 1002 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Phylogenetic Comparative Methods on Phylogenetic Networks with Reticulations. (15th June 2018) Authors: Bastide, Paul; Solís-Lemus, Claudia; Kriebel, Ricardo; William Sparks, K; Ané, Cécile Editors: Burbrink, Frank Journal: Systematic biology Issue: Volume 67:Number 5(2018:Oct.) Page Start: 800 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Rivers and landscape ecology of a plant virus, Rice yellow mottle virus along the Niger Valley. Issue 2 (17th August 2021) Authors: Issaka, Souley; Traoré, Oumar; Longué, Régis Dimitri Skopé; Pinel-Galzi, Agnès; Gill, Mandev S; Dellicour, Simon; Bastide, Paul; Guindon, Stéphane; Hébrard, Eugénie; Dugué, Marie-Jo; Séré, Yacouba; Semballa, Silla; Aké, Séverin; Lemey, Philippe; Fargette, Denis Journal: Virus evolution Issue: Volume 7:Issue 2(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗