1. Accelerating surveillance and research of antimicrobial resistance – an online repository for sharing of antimicrobial susceptibility data associated with whole-genome sequences. Issue 5 (7th May 2020) Authors: Matamoros, Sébastien; Hendriksen, Rene S.; Pataki, Bálint Ármin; Pakseresht, Nima; Rossello, Marc; Silvester, Nicole; Amid, Clara; Aarestrup, Frank M.; Koopmans, Marion; Cochrane, Guy; Csabai, Istvan; Lund, Ole; Schultsz, Constance Journal: Microbial genomics Issue: Volume 6:Issue 5(2020) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Benchtop Whole-Genome Sequencing for Identification of Nosocomial Outbreaks in Tanzania. (22nd February 2016) Authors: Sonda, Tolbert; Kumburu, Happiness; Zwetselaar, Marco van; Ahrenfeldt, Johanne; Alifrangis, Michael; Lund, Ole; Kibiki, Gibson; Aarestrup, Frank M. Journal: Infection control and hospital epidemiology Issue: Volume 37:Number 5(2016) Page Start: 622 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Comparative genomics of quinolone‐resistant and susceptible Campylobacter jejuni of poultry origin from major poultry producing European countries (GENCAMP). Issue 5 (16th May 2018) Authors: Leekitcharoenphon, Pimlapas; Garcia‐Graells, Cristina; Botteldoorn, Nadine; Dierick, Katelijne; Kempf, Isabelle; Olkkola, Satu; Rossi, Mirko; Nykäsenoja, Suvi; Malorny, Burkhard; Stingl, Kerstin; Battisti, Antonio; Franco, Alessia; Mossong, Joël; Veldman, Kees; Mevius, Dik; Wasyl, Dariusz; Wieczo... Journal: EFSA supporting publications Issue: Volume 15:Issue 5(2018) Page Start: n/a Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Description and determinants of the faecal resistome and microbiome of farmers and slaughterhouse workers: A metagenome-wide cross-sectional study. (October 2020) Authors: Van Gompel, Liese; Luiken, Roosmarijn E.C.; Hansen, Rasmus B.; Munk, Patrick; Bouwknegt, Martijn; Heres, Lourens; Greve, Gerdit D.; Scherpenisse, Peter; Jongerius-Gortemaker, Betty G.M.; Tersteeg-Zijderveld, Monique H.G.; García-Cobos, Silvia; Dohmen, Wietske; Dorado-García, Alejandro; Wagenaar, ... Journal: Environment international Issue: Volume 143(2020) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Farm dust resistomes and bacterial microbiomes in European poultry and pig farms. (October 2020) Authors: Luiken, Roosmarijn E.C.; Van Gompel, Liese; Bossers, Alex; Munk, Patrick; Joosten, Philip; Hansen, Rasmus Borup; Knudsen, Berith E.; García-Cobos, Silvia; Dewulf, Jeroen; Aarestrup, Frank M.; Wagenaar, Jaap A.; Smit, Lidwien A.M.; Mevius, Dik J.; Heederik, Dick J.J.; Schmitt, Heike Journal: Environment international Issue: Volume 143(2020) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Global Food-source Identifier (GFI): Collaborative virtual research environment and shared data catalogue for the foodborne outbreak investigation international community. (March 2021) Authors: Ribeiro Duarte, Ana Sofia; Nielsen, Cecilie Liv; Candela, Leonardo; Valentin, Lars; Aarestrup, Frank M.; Vigre, Håkan Journal: Food control Issue: Volume 121(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Patterns of infections, aetiological agents and antimicrobial resistance at a tertiary care hospital in northern Tanzania. Issue 4 (3rd February 2017) Authors: Kumburu, Happiness Houka; Sonda, Tolbert; Mmbaga, Blandina Theophil; Alifrangis, Michael; Lund, Ole; Kibiki, Gibson; Aarestrup, Frank M. Journal: Tropical medicine & international health Issue: Volume 22:Issue 4(2017) Page Start: 454 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Plasmid characterization in bacterial isolates of public health relevance in a tertiary healthcare facility in Kilimanjaro region, Tanzania. (September 2022) Authors: Sengeruan, Lameck Pashet; van Zwetselaar, Marco; Kumburu, Happiness; Aarestrup, Frank M.; Kreppel, Katharina; Sauli, Elingarami; Sonda, Tolbert Journal: Journal of global antimicrobial resistance Issue: Volume 30(2022) Page Start: 384 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. ResFinder – an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes. Issue 1 (24th January 2022) Authors: Florensa, Alfred Ferrer; Kaas, Rolf Sommer; Clausen, Philip Thomas Lanken Conradsen; Aytan-Aktug, Derya; Aarestrup, Frank M. Journal: Microbial genomics Issue: Volume 8:Issue 1(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Rice protein concentrate as a fish meal substitute in Oreochromis niloticus: Effects on immune response, intestinal cytokines, Aeromonas veronii resistance, and gut microbiota composition. Issue 126 (July 2022) Authors: Reda, Rasha M.; Maricchiolo, Giulia; Quero, Grazia Marina; Basili, Marco; Aarestrup, Frank M.; Pansera, Lidia; Mirto, Simone; Abd El-Fattah, Amir H.; Alagawany, Mahmoud; Abdel Rahman, Afaf N. Journal: Fish & shellfish immunology Issue: Issue 126(2022) Page Start: 237 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗